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Description : expansin A4
Gene families : OG_42_0000014 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000014_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Selaginella: 143857 | |
| Cluster | HCCA clusters: Cluster_14 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_26925 | No alias | expansin-a10 | 0.03 | Orthogroups_2024-Update | |
| A4A49_38718 | No alias | expansin-a7 | 0.02 | Orthogroups_2024-Update | |
| At2g28950 | No alias | EXPA6 [Source:UniProtKB/TrEMBL;Acc:A0A178VZL6] | 0.04 | Orthogroups_2024-Update | |
| Bradi5g19340 | No alias | expansin A13 | 0.02 | Orthogroups_2024-Update | |
| Brara.B03352.1 | No alias | alpha-class expansin | 0.03 | Orthogroups_2024-Update | |
| Brara.E03529.1 | No alias | alpha-class expansin | 0.02 | Orthogroups_2024-Update | |
| Brara.F03390.1 | No alias | alpha-class expansin | 0.02 | Orthogroups_2024-Update | |
| Glyma.04G021600 | No alias | expansin 11 | 0.04 | Orthogroups_2024-Update | |
| Glyma.06G021700 | No alias | expansin 11 | 0.02 | Orthogroups_2024-Update | |
| Glyma.18G153500 | No alias | expansin A4 | 0.04 | Orthogroups_2024-Update | |
| Glyma.19G024200 | No alias | expansin A15 | 0.03 | Orthogroups_2024-Update | |
| HORVU0Hr1G032890.2 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Kfl00557_g9 | kfl00557_g9_v1.1 | (at1g12560 : 146.0) Member of Alpha-Expansin Gene... | 0.01 | Orthogroups_2024-Update | |
| LOC_Os03g06020 | No alias | expansin precursor, putative, expressed | 0.02 | Orthogroups_2024-Update | |
| LOC_Os03g21820 | No alias | expansin precursor, putative, expressed | 0.02 | Orthogroups_2024-Update | |
| MA_10377235g0010 | No alias | (at2g40610 : 412.0) member of Alpha-Expansin Gene... | 0.02 | Orthogroups_2024-Update | |
| MA_75790g0010 | No alias | (at5g05290 : 306.0) Encodes an expansin. Naming... | 0.02 | Orthogroups_2024-Update | |
| MA_86877g0010 | No alias | (at1g69530 : 387.0) Member of Alpha-Expansin Gene... | 0.03 | Orthogroups_2024-Update | |
| MA_915221g0010 | No alias | (at1g69530 : 376.0) Member of Alpha-Expansin Gene... | 0.03 | Orthogroups_2024-Update | |
| Mp1g22700.1 | No alias | alpha-class expansin | 0.02 | Orthogroups_2024-Update | |
| PSME_00029310-RA | No alias | (at1g26770 : 386.0) Encodes an expansin. Naming... | 0.04 | Orthogroups_2024-Update | |
| PSME_00050247-RA | No alias | (at2g40610 : 400.0) member of Alpha-Expansin Gene... | 0.02 | Orthogroups_2024-Update | |
| PSME_00051817-RA | No alias | (at1g20190 : 379.0) member of Alpha-Expansin Gene... | 0.02 | Orthogroups_2024-Update | |
| Potri.004G123200 | No alias | expansin A1 | 0.03 | Orthogroups_2024-Update | |
| Potri.006G086100 | No alias | Barwin-like endoglucanases superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Potri.013G154700 | No alias | expansin A8 | 0.02 | Orthogroups_2024-Update | |
| Potri.016G135200 | No alias | expansin A8 | 0.02 | Orthogroups_2024-Update | |
| Potri.017G140000 | No alias | expansin A13 | 0.04 | Orthogroups_2024-Update | |
| Pp1s11_29V6 | No alias | expansin 2 | 0.02 | Orthogroups_2024-Update | |
| Pp1s246_53V6 | No alias | alpha-expansin 1 | 0.02 | Orthogroups_2024-Update | |
| Pp1s325_11V6 | No alias | expa6 gene for putative alpha expansin protein family EXPA6 | 0.02 | Orthogroups_2024-Update | |
| Pp1s75_138V6 | No alias | alpha-expansin 8 | 0.02 | Orthogroups_2024-Update | |
| Sobic.003G338801.1 | No alias | alpha-class expansin | 0.03 | Orthogroups_2024-Update | |
| Sobic.004G121700.1 | No alias | alpha-class expansin | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000272 | polysaccharide catabolic process | IEP | Predicted GO |
| MF | GO:0003824 | catalytic activity | IEP | Predicted GO |
| MF | GO:0005199 | structural constituent of cell wall | IEP | Predicted GO |
| BP | GO:0006720 | isoprenoid metabolic process | IEP | Predicted GO |
| BP | GO:0008299 | isoprenoid biosynthetic process | IEP | Predicted GO |
| BP | GO:0009664 | plant-type cell wall organization | IEP | Predicted GO |
| MF | GO:0016160 | amylase activity | IEP | Predicted GO |
| MF | GO:0016161 | beta-amylase activity | IEP | Predicted GO |
| MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | Predicted GO |
| MF | GO:0020037 | heme binding | IEP | Predicted GO |
| BP | GO:0045229 | external encapsulating structure organization | IEP | Predicted GO |
| MF | GO:0046906 | tetrapyrrole binding | IEP | Predicted GO |
| MF | GO:0048037 | cofactor binding | IEP | Predicted GO |
| MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | Predicted GO |
| BP | GO:0055114 | oxidation-reduction process | IEP | Predicted GO |
| BP | GO:0071554 | cell wall organization or biogenesis | IEP | Predicted GO |
| BP | GO:0071555 | cell wall organization | IEP | Predicted GO |
| BP | GO:0071669 | plant-type cell wall organization or biogenesis | IEP | Predicted GO |
| No external refs found! |