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  5. 146823

146823


Description : DEAD/DEAH box RNA helicase family protein


Gene families : OG_42_0003368 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003368_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 146823
Cluster HCCA clusters: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
At5g11200 No alias DEAD/DEAH box RNA helicase family protein... 0.02 Orthogroups_2024-Update
Glyma.04G067600 No alias DEAD/DEAH box RNA helicase family protein 0.02 Orthogroups_2024-Update
MA_99733g0010 No alias (at5g11170 : 745.0) DEAD/DEAH box RNA helicase family... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000776 kinetochore IEP Predicted GO
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0004814 arginine-tRNA ligase activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
BP GO:0006420 arginyl-tRNA aminoacylation IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
CC GO:0015934 large ribosomal subunit IEP Predicted GO
MF GO:0017056 structural constituent of nuclear pore IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0034508 centromere complex assembly IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
CC GO:0044391 ribosomal subunit IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
MF GO:0140098 catalytic activity, acting on RNA IEP Predicted GO
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 72 237
IPR001650 Helicase_C 277 384
No external refs found!