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  5. 151097

151097


Description : syntaxin of plants 124


Gene families : OG_42_0000336 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000336_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 151097
Cluster HCCA clusters: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
74098 No alias syntaxin of plants 124 0.04 Orthogroups_2024-Update
A4A49_40935 No alias syntaxin-124 0.03 Orthogroups_2024-Update
Bradi3g07970 No alias syntaxin of plants 124 0.04 Orthogroups_2024-Update
Bradi4g05940 No alias syntaxin of plants 131 0.02 Orthogroups_2024-Update
GRMZM2G029270 No alias syntaxin of plants 124 0.03 Orthogroups_2024-Update
Glyma.02G195400 No alias syntaxin of plants 121 0.01 Orthogroups_2024-Update
HORVU2Hr1G043130.15 No alias Qa-type SYP1-group component of SNARE membrane fusion complex 0.02 Orthogroups_2024-Update
MA_28961g0010 No alias (at1g11250 : 290.0) member of SYP12 Gene Family;... 0.03 Orthogroups_2024-Update
PSME_00055228-RA No alias (at4g33990 : 129.0) embryo defective 2758 (EMB2758);... 0.02 Orthogroups_2024-Update
Potri.007G123000 No alias syntaxin of plants 131 0.02 Orthogroups_2024-Update
Potri.016G068600 No alias syntaxin of plants 121 0.03 Orthogroups_2024-Update
Seita.1G039700.1 No alias Qa-type SYP1-group component of SNARE membrane fusion complex 0.02 Orthogroups_2024-Update
Seita.4G229100.1 No alias Qa-type SYP1-group component of SNARE membrane fusion complex 0.02 Orthogroups_2024-Update
Sobic.008G115500.1 No alias Qa-type SYP1-group component of SNARE membrane fusion complex 0.03 Orthogroups_2024-Update
Solyc01g056810 No alias Syntaxin (AHRD V3.3 *** A0F0A7_NICBE) 0.02 Orthogroups_2024-Update
Solyc10g081580 No alias Syntaxin (AHRD V3.3 *** A0F0A7_NICBE) 0.02 Orthogroups_2024-Update
evm.model.contig_2095.12 No alias (at5g08080 : 84.7) member of SYP13 Gene Family; syntaxin... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003678 DNA helicase activity IEP Predicted GO
CC GO:0005730 nucleolus IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
MF GO:0008134 transcription factor binding IEP Predicted GO
MF GO:0008375 acetylglucosaminyltransferase activity IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000727 T_SNARE_dom 247 299
IPR006011 Syntaxin_N 43 246
No external refs found!