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  5. 159042

159042


Description : ribosomal protein large subunit 27


Gene families : OG_42_0002035 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002035_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 159042
Cluster HCCA clusters: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
A4A49_35915 No alias 50s ribosomal protein l27, chloroplastic 0.03 Orthogroups_2024-Update
Bradi2g59210 No alias ribosomal protein large subunit 27 0.06 Orthogroups_2024-Update
Brara.J01970.1 No alias component *(bL27m) of large mitoribosomal-subunit proteome 0.03 Orthogroups_2024-Update
Cre06.g300800 No alias ribosomal protein large subunit 27 0.06 Orthogroups_2024-Update
Sobic.003G408000.2 No alias component *(bL27c) of large plastid ribosomal-subunit proteome 0.02 Orthogroups_2024-Update
Sobic.007G071300.1 No alias component *(bL27m) of large mitoribosomal-subunit proteome 0.02 Orthogroups_2024-Update
Sopen11g027540 No alias Ribosomal L27 protein 0.03 Orthogroups_2024-Update
evm.model.tig00022075.47 No alias (p30155|rk27_tobac : 110.0) 50S ribosomal protein L27,... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0004097 catechol oxidase activity IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
InterPro domains Description Start Stop
IPR001684 Ribosomal_L27 45 124
No external refs found!