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  5. 160385

160385


Description : U2 snRNP auxilliary factor, large subunit, splicing factor


Gene families : OG_42_0001657 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001657_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 160385
Cluster HCCA clusters: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
Brara.H01687.1 No alias large subunit of U2AF pre-RNA splicing auxiliary factor complex 0.02 Orthogroups_2024-Update
Cre09.g391949 No alias U2 snRNP auxilliary factor, large subunit, splicing factor 0.02 Orthogroups_2024-Update
Kfl00054_0160 kfl00054_0160_v1.1 (at1g60900 : 445.0) U2 snRNP auxilliary factor, large... 0.02 Orthogroups_2024-Update
Sobic.005G216300.1 No alias large subunit of U2AF pre-RNA splicing auxiliary factor complex 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0003980 UDP-glucose:glycoprotein glucosyltransferase activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
MF GO:0008536 Ran GTPase binding IEP Predicted GO
BP GO:0016579 protein deubiquitination IEP Predicted GO
MF GO:0017016 Ras GTPase binding IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0030151 molybdenum ion binding IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
MF GO:0035251 UDP-glucosyltransferase activity IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
BP GO:0070646 protein modification by small protein removal IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
MF GO:0140098 catalytic activity, acting on RNA IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000504 RRM_dom 339 397
IPR000504 RRM_dom 185 254
No external refs found!