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  4. Sequence
  5. 160411

160411


Description : photosystem I light harvesting complex gene 3


Gene families : OG_42_0005254 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005254_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 160411
Cluster HCCA clusters: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
A4A49_09113 No alias chlorophyll a-b binding protein 8, chloroplastic 0.02 Orthogroups_2024-Update
A4A49_28400 No alias chlorophyll a-b binding protein 8, chloroplastic 0.03 Orthogroups_2024-Update
At1g61520 No alias Chlorophyll a-b binding protein, chloroplastic... 0.02 Orthogroups_2024-Update
Bradi3g07190 No alias photosystem I light harvesting complex gene 3 0.02 Orthogroups_2024-Update
Brara.A02541.1 No alias component *(LHCa3) of LHC-I complex 0.02 Orthogroups_2024-Update
Brara.I01499.1 No alias component *(LHCa3) of LHC-I complex 0.02 Orthogroups_2024-Update
Cre11.g467573 No alias photosystem I light harvesting complex gene 3 0.02 Orthogroups_2024-Update
Glyma.02G309500 No alias photosystem I light harvesting complex gene 3 0.05 Orthogroups_2024-Update
Glyma.14G003400 No alias photosystem I light harvesting complex gene 3 0.04 Orthogroups_2024-Update
HORVU6Hr1G033160.11 No alias component *(LHCa3) of LHC-I complex 0.03 Orthogroups_2024-Update
LOC_Os02g10390 No alias chlorophyll A-B binding protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_815900g0010 No alias (at1g61520 : 372.0) PSI type III chlorophyll a/b-binding... 0.02 Orthogroups_2024-Update
Potri.014G172400 No alias photosystem I light harvesting complex gene 3 0.03 Orthogroups_2024-Update
Pp1s197_123V6 No alias type iii chlorophyll a b-binding protein 0.03 Orthogroups_2024-Update
Pp1s214_86V6 No alias type iii chlorophyll a b-binding protein 0.02 Orthogroups_2024-Update
Pp1s214_87V6 No alias type iii chlorophyll a b-binding protein 0.02 Orthogroups_2024-Update
Pp1s429_33V6 No alias type iii chlorophyll a b-binding protein 0.02 Orthogroups_2024-Update
Seita.4G219400.1 No alias component *(LHCa3) of LHC-I complex 0.03 Orthogroups_2024-Update
Sobic.010G189300.1 No alias component *(LHCa3) of LHC-I complex 0.03 Orthogroups_2024-Update
Solyc10g007690 No alias Chlorophyll a-b binding protein, chloroplastic (AHRD... 0.05 Orthogroups_2024-Update
Solyc12g011280 No alias Chlorophyll a-b binding protein, chloroplastic (AHRD... 0.02 Orthogroups_2024-Update
Sopen10g003600 No alias Chlorophyll A-B binding protein 0.03 Orthogroups_2024-Update
Sopen12g006610 No alias Chlorophyll A-B binding protein 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004356 glutamate-ammonia ligase activity IEP Predicted GO
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP Predicted GO
MF GO:0004421 hydroxymethylglutaryl-CoA synthase activity IEP Predicted GO
MF GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity IEP Predicted GO
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
MF GO:0004615 phosphomannomutase activity IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0006541 glutamine metabolic process IEP Predicted GO
BP GO:0006542 glutamine biosynthetic process IEP Predicted GO
BP GO:0006555 methionine metabolic process IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
BP GO:0009225 nucleotide-sugar metabolic process IEP Predicted GO
BP GO:0009226 nucleotide-sugar biosynthetic process IEP Predicted GO
BP GO:0009298 GDP-mannose biosynthetic process IEP Predicted GO
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Predicted GO
BP GO:0015936 coenzyme A metabolic process IEP Predicted GO
MF GO:0016211 ammonia ligase activity IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Predicted GO
BP GO:0019673 GDP-mannose metabolic process IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 70 248
No external refs found!