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  5. 162003

162003


Description : polyubiquitin 10


Gene families : OG_42_0000048 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000048_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 162003
Cluster HCCA clusters: Cluster_174

Target Alias Description ECC score Gene Family Method Actions
At5g20620 No alias Polyubiquitin 4 [Source:UniProtKB/Swiss-Prot;Acc:P0CH32] 0.02 Orthogroups_2024-Update
Bradi3g52300 No alias polyubiquitin 10 0.03 Orthogroups_2024-Update
Cre09.g396400 No alias related to ubiquitin 1 0.03 Orthogroups_2024-Update
HORVU4Hr1G089720.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Kfl00348_0100 kfl00348_0100_v1.... (at2g35635 : 236.0) encodes a ubiquitin-like protein... 0.02 Orthogroups_2024-Update
Pp1s17_265V6 No alias polyubiquitin containing 7 ubiquitin monomers 0.02 Orthogroups_2024-Update
Pp1s227_93V6 No alias C17L7.240; polyubiquitin (UBQ10) (SEN3) [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Pp1s46_189V6 No alias polyubiquitin 0.03 Orthogroups_2024-Update
Seita.2G207500.1 No alias RUB ubiquitin-fold protein 0.05 Orthogroups_2024-Update
Sobic.002G309000.1 No alias component *(eL40) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Sobic.010G210000.1 No alias RUB ubiquitin-fold protein 0.02 Orthogroups_2024-Update
evm.model.tig00000144.76 No alias (at2g35635 : 253.0) encodes a ubiquitin-like protein... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003989 acetyl-CoA carboxylase activity IEP Predicted GO
MF GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity IEP Predicted GO
MF GO:0004615 phosphomannomutase activity IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006555 methionine metabolic process IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009225 nucleotide-sugar metabolic process IEP Predicted GO
BP GO:0009226 nucleotide-sugar biosynthetic process IEP Predicted GO
BP GO:0009298 GDP-mannose biosynthetic process IEP Predicted GO
MF GO:0016421 CoA carboxylase activity IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Predicted GO
BP GO:0019673 GDP-mannose metabolic process IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000626 Ubiquitin_dom 155 226
IPR000626 Ubiquitin_dom 3 74
IPR000626 Ubiquitin_dom 231 302
IPR000626 Ubiquitin_dom 79 150
No external refs found!