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  5. 163447

163447


Description : ubiquitin 4


Gene families : OG_42_0000048 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000048_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 163447
Cluster HCCA clusters: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
At4g02890 No alias Polyubiquitin 14 [Source:UniProtKB/Swiss-Prot;Acc:Q3E7T8] 0.02 Orthogroups_2024-Update
At5g03240 No alias Ubiquitin 4 [Source:UniProtKB/TrEMBL;Acc:A0A1P8BGQ7] 0.02 Orthogroups_2024-Update
Bradi1g32700 No alias polyubiquitin 10 0.03 Orthogroups_2024-Update
Brara.C02747.1 No alias UBQ ubiquitin-fold protein 0.03 Orthogroups_2024-Update
Brara.H00721.1 No alias RUB ubiquitin-fold protein 0.02 Orthogroups_2024-Update
Brara.I02135.1 No alias UBQ ubiquitin-fold protein 0.02 Orthogroups_2024-Update
Brara.J02833.1 No alias UBQ ubiquitin-fold protein 0.02 Orthogroups_2024-Update
Glyma.13G138600 No alias ubiquitin 4 0.03 Orthogroups_2024-Update
HORVU6Hr1G020140.6 No alias UBQ ubiquitin-fold protein 0.03 Orthogroups_2024-Update
HORVU7Hr1G029150.2 No alias RUB ubiquitin-fold protein 0.02 Orthogroups_2024-Update
LOC_Os09g27930 No alias ubiquitin fusion protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os09g31019 No alias ubiquitin fusion protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_9420337g0010 No alias (at5g03240 : 357.0) encodes ubiquitin that is attached... 0.02 Orthogroups_2024-Update
Mp3g22950.1 No alias ubiquitin-fold protein (UBQ) 0.02 Orthogroups_2024-Update
Mp4g02740.1 No alias ubiquitin-fold protein (UBQ) 0.01 Orthogroups_2024-Update
Pp1s129_28V6 No alias Putative polyubiquitin 0.02 Orthogroups_2024-Update
Pp1s175_73V6 No alias polyubiquitin 0.03 Orthogroups_2024-Update
Pp1s351_6V6 No alias polyubiquitin containing 7 ubiquitin monomers 0.02 Orthogroups_2024-Update
Pp1s46_189V6 No alias polyubiquitin 0.02 Orthogroups_2024-Update
Pp1s4_496V6 No alias No description available 0.02 Orthogroups_2024-Update
Seita.2G207500.1 No alias RUB ubiquitin-fold protein 0.04 Orthogroups_2024-Update
Seita.3G398300.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.5G081000.1 No alias UBQ ubiquitin-fold protein 0.02 Orthogroups_2024-Update
Sobic.001G267300.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.002G204200.1 No alias RUB ubiquitin-fold protein 0.03 Orthogroups_2024-Update
Sobic.002G292500.1 No alias component *(eL40) of large ribosomal-subunit (LSU) proteome 0.02 Orthogroups_2024-Update
Sobic.004G050100.1 No alias UBQ ubiquitin-fold protein 0.04 Orthogroups_2024-Update
Sobic.004G273300.1 No alias UBQ ubiquitin-fold protein 0.02 Orthogroups_2024-Update
Sobic.010G040600.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.010G239500.6 No alias UBQ ubiquitin-fold protein 0.03 Orthogroups_2024-Update
Sopen07g032270 No alias Ubiquitin family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity IEP Predicted GO
MF GO:0004615 phosphomannomutase activity IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
BP GO:0006555 methionine metabolic process IEP Predicted GO
MF GO:0008047 enzyme activator activity IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009225 nucleotide-sugar metabolic process IEP Predicted GO
BP GO:0009226 nucleotide-sugar biosynthetic process IEP Predicted GO
BP GO:0009298 GDP-mannose biosynthetic process IEP Predicted GO
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Predicted GO
MF GO:0015020 glucuronosyltransferase activity IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
BP GO:0019673 GDP-mannose metabolic process IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000626 Ubiquitin_dom 231 302
IPR000626 Ubiquitin_dom 79 150
IPR000626 Ubiquitin_dom 155 226
IPR000626 Ubiquitin_dom 307 378
IPR000626 Ubiquitin_dom 3 74
No external refs found!