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  5. Sopen01g016960

Sopen01g016960


Description : YT521-B-like domain


Gene families : OG_42_0000396 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000396_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen01g016960
Cluster HCCA clusters: Cluster_158

Target Alias Description ECC score Gene Family Method Actions
At3g17330 No alias At3g17330 [Source:UniProtKB/TrEMBL;Acc:Q1JPL5] 0.03 Orthogroups_2024-Update
At5g61020 No alias ECT3 [Source:UniProtKB/TrEMBL;Acc:A0A178UM32] 0.03 Orthogroups_2024-Update
Bradi1g05970 No alias evolutionarily conserved C-terminal region 2 0.02 Orthogroups_2024-Update
Brara.B02570.1 No alias methylation reader *(ECT) 0.02 Orthogroups_2024-Update
HORVU1Hr1G008330.5 No alias methylation reader *(ECT) 0.03 Orthogroups_2024-Update
HORVU5Hr1G094950.2 No alias methylation reader *(ECT) 0.04 Orthogroups_2024-Update
HORVU7Hr1G058250.46 No alias methylation reader *(ECT) 0.03 Orthogroups_2024-Update
Kfl00101_0290 kfl00101_0290_v1.1 (at3g13060 : 203.0) evolutionarily conserved C-terminal... 0.03 Orthogroups_2024-Update
LOC_Os08g44200 No alias ECT5, putative, expressed 0.02 Orthogroups_2024-Update
MA_10429321g0010 No alias (at3g17330 : 264.0) evolutionarily conserved C-terminal... 0.03 Orthogroups_2024-Update
Potri.001G056100 No alias evolutionarily conserved C-terminal region 5 0.04 Orthogroups_2024-Update
Sobic.002G047000.2 No alias methylation reader *(ECT) 0.03 Orthogroups_2024-Update
Sobic.006G208800.1 No alias methylation reader *(ECT) 0.02 Orthogroups_2024-Update
Solyc01g028860 No alias evolutionarily conserved C-terminal region 2 (AHRD V3.3... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007275 YTH_domain 447 584
No external refs found!