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  5. 165098

165098


Description : Pectin lyase-like superfamily protein


Gene families : OG_42_0000087 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000087_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 165098
Cluster HCCA clusters: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
431592 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.06 Orthogroups_2024-Update
At5g47500 No alias Probable pectinesterase 68... 0.01 Orthogroups_2024-Update
HORVU7Hr1G076580.1 No alias pectin methylesterase 0.01 Orthogroups_2024-Update
LOC_Os01g44340 No alias pectinesterase, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g12410 No alias pectinesterase, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os09g39760 No alias pectinesterase, putative, expressed 0.01 Orthogroups_2024-Update
PSME_00020051-RA No alias (at5g19730 : 262.0) Pectin lyase-like superfamily... 0.01 Orthogroups_2024-Update
Potri.006G134800 No alias pectin methylesterase 1 0.01 Orthogroups_2024-Update
Potri.006G137100 No alias Pectin lyase-like superfamily protein 0.01 Orthogroups_2024-Update
Seita.3G333900.1 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
Seita.9G525400.1 No alias pectin methylesterase 0.08 Orthogroups_2024-Update
Sobic.001G490800.1 No alias pectin methylesterase 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA InterProScan predictions
BP GO:0042545 cell wall modification IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 61 352
No external refs found!