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  5. 166496

166496


Description : serine hydroxymethyltransferase 4


Gene families : OG_42_0000626 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000626_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 166496
Cluster HCCA clusters: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
Brara.A00543.1 No alias EC_2.1 transferase transferring one-carbon group &... 0.03 Orthogroups_2024-Update
Glyma.05G152100 No alias serine hydroxymethyltransferase 4 0.03 Orthogroups_2024-Update
MA_11357g0010 No alias (at4g13930 : 800.0) Encodes a serine... 0.02 Orthogroups_2024-Update
MA_730617g0010 No alias (at4g32520 : 720.0) Encodes a serine... 0.03 Orthogroups_2024-Update
PSME_00004358-RA No alias (at4g32520 : 524.0) Encodes a serine... 0.03 Orthogroups_2024-Update
Potri.005G170800 No alias serine hydroxymethyltransferase 7 0.02 Orthogroups_2024-Update
Potri.008G002900 No alias serine transhydroxymethyltransferase 1 0.02 Orthogroups_2024-Update
Pp1s291_35V6 No alias serine hydroxymethyltransferase 0.02 Orthogroups_2024-Update
Seita.5G398800.1 No alias serine hydroxymethyltransferase *(SHM) & serine... 0.03 Orthogroups_2024-Update
Solyc05g053810 No alias Serine hydroxymethyltransferase (AHRD V3.3 *** M1BAA6_SOLTU) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003989 acetyl-CoA carboxylase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
MF GO:0008509 anion transmembrane transporter activity IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Predicted GO
MF GO:0015020 glucuronosyltransferase activity IEP Predicted GO
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
BP GO:0015689 molybdate ion transport IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0016049 cell growth IEP Predicted GO
MF GO:0016421 CoA carboxylase activity IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
BP GO:0040007 growth IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
InterPro domains Description Start Stop
IPR039429 SHMT-like_dom 13 411
No external refs found!