171028


Description : Cobalamin-independent synthase family protein


Gene families : OG_42_0002037 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002037_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 171028
Cluster HCCA clusters: Cluster_158

Target Alias Description ECC score Gene Family Method Actions
A4A49_56331 No alias 5-methyltetrahydropteroyltriglutamate--homocysteine... 0.05 Orthogroups_2024-Update
Bradi4g01200 No alias Cobalamin-independent synthase family protein 0.03 Orthogroups_2024-Update
Brara.C03035.1 No alias methyl-tetrahydrofolate-dependent methionine synthase &... 0.04 Orthogroups_2024-Update
Cre03.g180750 No alias methionine synthase 3 0.02 Orthogroups_2024-Update
Glyma.19G114500 No alias Cobalamin-independent synthase family protein 0.03 Orthogroups_2024-Update
HORVU4Hr1G002270.3 No alias methyl-tetrahydrofolate-dependent methionine synthase &... 0.03 Orthogroups_2024-Update
PSME_00003087-RA No alias (at5g17920 : 1128.0) Encodes a cytosolic... 0.02 Orthogroups_2024-Update
PSME_00023768-RA No alias (at5g17920 : 1243.0) Encodes a cytosolic... 0.04 Orthogroups_2024-Update
Potri.004G190900 No alias Cobalamin-independent synthase family protein 0.02 Orthogroups_2024-Update
Pp1s27_81V6 No alias vitamin-b12 independent methionine... 0.02 Orthogroups_2024-Update
Pp1s33_110V6 No alias vitamin-b12 independent methionine... 0.06 Orthogroups_2024-Update
Pp1s399_19V6 No alias vitamin-b12 independent methionine... 0.02 Orthogroups_2024-Update
Seita.3G035500.1 No alias methyl-tetrahydrofolate-dependent methionine synthase &... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEA InterProScan predictions
MF GO:0008270 zinc ion binding IEA InterProScan predictions
BP GO:0008652 cellular amino acid biosynthetic process IEA InterProScan predictions
BP GO:0009086 methionine biosynthetic process IEA InterProScan predictions
Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Predicted GO
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Predicted GO
MF GO:0003989 acetyl-CoA carboxylase activity IEP Predicted GO
MF GO:0004356 glutamate-ammonia ligase activity IEP Predicted GO
MF GO:0004478 methionine adenosyltransferase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006541 glutamine metabolic process IEP Predicted GO
BP GO:0006542 glutamine biosynthetic process IEP Predicted GO
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Predicted GO
BP GO:0006732 coenzyme metabolic process IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
BP GO:0009108 coenzyme biosynthetic process IEP Predicted GO
BP GO:0009250 glucan biosynthetic process IEP Predicted GO
MF GO:0016211 ammonia ligase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016421 CoA carboxylase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0016874 ligase activity IEP Predicted GO
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Predicted GO
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Predicted GO
BP GO:0017144 drug metabolic process IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0046500 S-adenosylmethionine metabolic process IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
BP GO:0051186 cofactor metabolic process IEP Predicted GO
BP GO:0051188 cofactor biosynthetic process IEP Predicted GO
BP GO:0051273 beta-glucan metabolic process IEP Predicted GO
BP GO:0051274 beta-glucan biosynthetic process IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
InterPro domains Description Start Stop
IPR002629 Met_Synth_C/arc 433 756
IPR013215 Cbl-indep_Met_Synth_N 3 317
No external refs found!