1. Home
  2. Species
  3. Selaginella moellendorffii
  4. Sequence
  5. 172230

172230


Description : ARM repeat superfamily protein


Gene families : OG_42_0000112 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000112_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 172230
Cluster HCCA clusters: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G168980 No alias plant U-box 23 0.02 Orthogroups_2024-Update
HORVU4Hr1G064070.1 No alias E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
HORVU6Hr1G077120.1 No alias E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
HORVU7Hr1G040790.2 No alias E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
MA_200041g0010 No alias (at3g19380 : 209.0) plant U-box 25 (PUB25); FUNCTIONS... 0.05 Orthogroups_2024-Update
PSME_00056652-RA No alias (at2g35930 : 195.0) Encodes a cytoplasmically localized... 0.04 Orthogroups_2024-Update
Sobic.006G274933.1 No alias E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Solyc01g005160 No alias Avr9/Cf-9 rapidly elicited protein 1 0.02 Orthogroups_2024-Update
Solyc01g007010 No alias U-box domain-containing family protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc01g007050 No alias U-box domain-containing family protein (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Solyc04g008100 No alias U-box domain-containing protein (AHRD V3.3 *** A0A0A0RAL4_9ROSI) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA InterProScan predictions
BP GO:0016567 protein ubiquitination IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR003613 Ubox_domain 11 82
No external refs found!