179704

Description : Pentatricopeptide repeat (PPR) superfamily protein

Gene families : OG_42_0160459 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Selaginella: 179704
Cluster	HCCA clusters: Cluster_7

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0005789	endoplasmic reticulum membrane	IEP	Predicted GO
CC	GO:0005875	microtubule associated complex	IEP	Predicted GO
CC	GO:0030286	dynein complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR032867	DYW_dom	528	641
IPR002885	Pentatricopeptide_repeat	117	143
IPR002885	Pentatricopeptide_repeat	218	239
IPR002885	Pentatricopeptide_repeat	495	523
IPR002885	Pentatricopeptide_repeat	246	276
IPR002885	Pentatricopeptide_repeat	145	171
IPR002885	Pentatricopeptide_repeat	15	40
IPR002885	Pentatricopeptide_repeat	41	90
IPR002885	Pentatricopeptide_repeat	348	395

External Links

No external refs found!