Description : Ribosomal protein S11 family protein
Gene families : OG_42_0001574 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001574_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Selaginella: 183051 | |
Cluster | HCCA clusters: Cluster_23 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
At3g52580 | No alias | 40S ribosomal protein S14-3... | 0.07 | Orthogroups_2024-Update | |
Bradi1g32830 | No alias | Ribosomal protein S11 family protein | 0.14 | Orthogroups_2024-Update | |
Bradi3g04790 | No alias | Ribosomal protein S11 family protein | 0.16 | Orthogroups_2024-Update | |
Bradi5g09460 | No alias | Ribosomal protein S11 family protein | 0.02 | Orthogroups_2024-Update | |
Brara.A03404.1 | No alias | component *(uS11) of small ribosomal-subunit (SSU) proteome | 0.15 | Orthogroups_2024-Update | |
Brara.C01814.1 | No alias | component *(uS11) of small ribosomal-subunit (SSU) proteome | 0.12 | Orthogroups_2024-Update | |
Brara.C03369.1 | No alias | component *(uS11) of small ribosomal-subunit (SSU) proteome | 0.17 | Orthogroups_2024-Update | |
Brara.D02197.1 | No alias | component *(uS11) of small ribosomal-subunit (SSU) proteome | 0.1 | Orthogroups_2024-Update | |
Brara.E00860.1 | No alias | component *(uS11) of small ribosomal-subunit (SSU) proteome | 0.17 | Orthogroups_2024-Update | |
Brara.E02925.1 | No alias | component *(uS11) of small ribosomal-subunit (SSU) proteome | 0.15 | Orthogroups_2024-Update | |
Brara.I03565.1 | No alias | component *(uS11) of small ribosomal-subunit (SSU) proteome | 0.03 | Orthogroups_2024-Update | |
Brara.J02603.1 | No alias | component *(uS11) of small ribosomal-subunit (SSU) proteome | 0.15 | Orthogroups_2024-Update | |
Cre11.g480150 | No alias | Ribosomal protein S11 family protein | 0.22 | Orthogroups_2024-Update | |
GRMZM2G069762 | No alias | Ribosomal protein S11 family protein | 0.15 | Orthogroups_2024-Update | |
GRMZM2G100462 | No alias | Ribosomal protein S11 family protein | 0.02 | Orthogroups_2024-Update | |
GRMZM2G120432 | No alias | Ribosomal protein S11 family protein | 0.07 | Orthogroups_2024-Update | |
Glyma.03G241100 | No alias | Ribosomal protein S11 family protein | 0.03 | Orthogroups_2024-Update | |
Glyma.03G241300 | No alias | Ribosomal protein S11 family protein | 0.06 | Orthogroups_2024-Update | |
Glyma.13G217200 | No alias | Ribosomal protein S11 family protein | 0.08 | Orthogroups_2024-Update | |
Glyma.15G095300 | No alias | Ribosomal protein S11 family protein | 0.09 | Orthogroups_2024-Update | |
Glyma.19G238600 | No alias | Ribosomal protein S11 family protein | 0.13 | Orthogroups_2024-Update | |
Glyma.19G238800 | No alias | Ribosomal protein S11 family protein | 0.08 | Orthogroups_2024-Update | |
HORVU0Hr1G004130.1 | No alias | component *(uS11) of small ribosomal-subunit (SSU) proteome | 0.03 | Orthogroups_2024-Update | |
LOC_Os02g06700 | No alias | ribosomal protein, putative, expressed | 0.05 | Orthogroups_2024-Update | |
MA_113075g0010 | No alias | (p19951|rs142_maize : 223.0) 40S ribosomal protein S14... | 0.07 | Orthogroups_2024-Update | |
Mp8g03250.1 | No alias | component RPS14 of SSU proteome | 0.12 | Orthogroups_2024-Update | |
Mp8g10900.1 | No alias | component RPS14 of SSU proteome | 0.08 | Orthogroups_2024-Update | |
PSME_00002720-RA | No alias | (p19951|rs142_maize : 226.0) 40S ribosomal protein S14... | 0.06 | Orthogroups_2024-Update | |
Potri.001G218700 | No alias | Ribosomal protein S11 family protein | 0.1 | Orthogroups_2024-Update | |
Potri.004G131800 | No alias | Ribosomal protein S11 family protein | 0.03 | Orthogroups_2024-Update | |
Pp1s271_98V6 | No alias | 40s ribosomal protein | 0.19 | Orthogroups_2024-Update | |
Pp1s316_6V6 | No alias | 40s ribosomal protein | 0.16 | Orthogroups_2024-Update | |
Seita.1G078300.1 | No alias | component *(uS11) of small ribosomal-subunit (SSU) proteome | 0.04 | Orthogroups_2024-Update | |
Seita.1G181800.1 | No alias | component *(uS11) of small ribosomal-subunit (SSU) proteome | 0.06 | Orthogroups_2024-Update | |
Seita.4G260200.1 | No alias | component *(uS11) of small ribosomal-subunit (SSU) proteome | 0.22 | Orthogroups_2024-Update | |
Seita.7G091900.1 | No alias | component *(uS11) of small ribosomal-subunit (SSU) proteome | 0.11 | Orthogroups_2024-Update | |
Sobic.006G106100.1 | No alias | component *(uS11) of small ribosomal-subunit (SSU) proteome | 0.15 | Orthogroups_2024-Update | |
Sobic.010G205400.1 | No alias | component *(uS11) of small ribosomal-subunit (SSU) proteome | 0.14 | Orthogroups_2024-Update | |
Sobic.010G206200.1 | No alias | component *(uS11) of small ribosomal-subunit (SSU) proteome | 0.13 | Orthogroups_2024-Update | |
Solyc02g070570 | No alias | 30S ribosomal protein S11 (AHRD V3.3 *** A0A0K9PCU6_ZOSMR) | 0.16 | Orthogroups_2024-Update | |
Solyc09g010100 | No alias | 30S ribosomal protein S11 (AHRD V3.3 *** A0A0K9PVQ7_ZOSMR) | 0.23 | Orthogroups_2024-Update | |
Solyc10g083280 | No alias | 40S ribosomal protein S14-2 | 0.21 | Orthogroups_2024-Update | |
Sopen02g019660 | No alias | Ribosomal protein S11 | 0.2 | Orthogroups_2024-Update | |
Sopen09g004840 | No alias | Ribosomal protein S11 | 0.17 | Orthogroups_2024-Update | |
Sopen10g032760 | No alias | Ribosomal protein S11 | 0.21 | Orthogroups_2024-Update | |
evm.model.contig_3384.21 | No alias | (p46295|rs14_chlre : 213.0) 40S ribosomal protein S14 -... | 0.24 | Orthogroups_2024-Update | |
evm.model.tig00001154.44 | No alias | (p19950|rs141_maize : 166.0) 40S ribosomal protein S14... | 0.08 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | InterProScan predictions |
CC | GO:0005840 | ribosome | IEA | InterProScan predictions |
BP | GO:0006412 | translation | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000151 | ubiquitin ligase complex | IEP | Predicted GO |
CC | GO:0000152 | nuclear ubiquitin ligase complex | IEP | Predicted GO |
MF | GO:0003723 | RNA binding | IEP | Predicted GO |
MF | GO:0003746 | translation elongation factor activity | IEP | Predicted GO |
MF | GO:0004055 | argininosuccinate synthase activity | IEP | Predicted GO |
MF | GO:0004834 | tryptophan synthase activity | IEP | Predicted GO |
CC | GO:0005622 | intracellular | IEP | Predicted GO |
CC | GO:0005680 | anaphase-promoting complex | IEP | Predicted GO |
CC | GO:0005759 | mitochondrial matrix | IEP | Predicted GO |
BP | GO:0006414 | translational elongation | IEP | Predicted GO |
BP | GO:0006520 | cellular amino acid metabolic process | IEP | Predicted GO |
BP | GO:0006525 | arginine metabolic process | IEP | Predicted GO |
BP | GO:0006526 | arginine biosynthetic process | IEP | Predicted GO |
BP | GO:0006568 | tryptophan metabolic process | IEP | Predicted GO |
BP | GO:0006576 | cellular biogenic amine metabolic process | IEP | Predicted GO |
BP | GO:0006586 | indolalkylamine metabolic process | IEP | Predicted GO |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Predicted GO |
BP | GO:0007088 | regulation of mitotic nuclear division | IEP | Predicted GO |
BP | GO:0007346 | regulation of mitotic cell cycle | IEP | Predicted GO |
BP | GO:0009064 | glutamine family amino acid metabolic process | IEP | Predicted GO |
BP | GO:0009084 | glutamine family amino acid biosynthetic process | IEP | Predicted GO |
BP | GO:0009308 | amine metabolic process | IEP | Predicted GO |
BP | GO:0010564 | regulation of cell cycle process | IEP | Predicted GO |
BP | GO:0010965 | regulation of mitotic sister chromatid separation | IEP | Predicted GO |
CC | GO:0015934 | large ribosomal subunit | IEP | Predicted GO |
BP | GO:0016070 | RNA metabolic process | IEP | Predicted GO |
MF | GO:0016836 | hydro-lyase activity | IEP | Predicted GO |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Predicted GO |
BP | GO:0030071 | regulation of mitotic metaphase/anaphase transition | IEP | Predicted GO |
CC | GO:0031461 | cullin-RING ubiquitin ligase complex | IEP | Predicted GO |
CC | GO:0031974 | membrane-enclosed lumen | IEP | Predicted GO |
BP | GO:0033043 | regulation of organelle organization | IEP | Predicted GO |
BP | GO:0033044 | regulation of chromosome organization | IEP | Predicted GO |
BP | GO:0033045 | regulation of sister chromatid segregation | IEP | Predicted GO |
BP | GO:0033047 | regulation of mitotic sister chromatid segregation | IEP | Predicted GO |
BP | GO:0042254 | ribosome biogenesis | IEP | Predicted GO |
BP | GO:0042430 | indole-containing compound metabolic process | IEP | Predicted GO |
CC | GO:0043233 | organelle lumen | IEP | Predicted GO |
BP | GO:0044106 | cellular amine metabolic process | IEP | Predicted GO |
CC | GO:0044391 | ribosomal subunit | IEP | Predicted GO |
CC | GO:0044422 | organelle part | IEP | Predicted GO |
CC | GO:0044446 | intracellular organelle part | IEP | Predicted GO |
BP | GO:0046483 | heterocycle metabolic process | IEP | Predicted GO |
BP | GO:0051128 | regulation of cellular component organization | IEP | Predicted GO |
BP | GO:0051726 | regulation of cell cycle | IEP | Predicted GO |
BP | GO:0051783 | regulation of nuclear division | IEP | Predicted GO |
BP | GO:0051983 | regulation of chromosome segregation | IEP | Predicted GO |
CC | GO:0070013 | intracellular organelle lumen | IEP | Predicted GO |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Predicted GO |
BP | GO:1901605 | alpha-amino acid metabolic process | IEP | Predicted GO |
BP | GO:1901987 | regulation of cell cycle phase transition | IEP | Predicted GO |
BP | GO:1901990 | regulation of mitotic cell cycle phase transition | IEP | Predicted GO |
BP | GO:1902099 | regulation of metaphase/anaphase transition of cell cycle | IEP | Predicted GO |
BP | GO:1905818 | regulation of chromosome separation | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001971 | Ribosomal_S11 | 29 | 147 |
No external refs found! |