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  4. Sequence
  5. 183274

183274


Description : high chlorophyll fluorescence phenotype 173


Gene families : OG_42_0005535 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005535_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 183274
Cluster HCCA clusters: Cluster_206

Target Alias Description ECC score Gene Family Method Actions
Bradi1g34525 No alias high chlorophyll fluorescence phenotype 173 0.03 Orthogroups_2024-Update
Cre13.g578650 No alias high chlorophyll fluorescence phenotype 173 0.02 Orthogroups_2024-Update
Glyma.07G000500 No alias high chlorophyll fluorescence phenotype 173 0.02 Orthogroups_2024-Update
Kfl00139_0220 kfl00139_0220_v1.1 (at1g16720 : 565.0) Encodes HCF173, a protein with weak... 0.02 Orthogroups_2024-Update
LOC_Os02g04510 No alias UOS1, putative, expressed 0.02 Orthogroups_2024-Update
MA_21385g0010 No alias (at1g16720 : 349.0) Encodes HCF173, a protein with weak... 0.02 Orthogroups_2024-Update
Potri.014G000400 No alias high chlorophyll fluorescence phenotype 173 0.02 Orthogroups_2024-Update
Pp1s326_65V6 No alias F17F16.7; expressed protein [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Seita.1G093200.1 No alias protein involved in PS-II assembly *(HCF173) 0.02 Orthogroups_2024-Update
Seita.4G271300.1 No alias protein involved in PS-II assembly *(HCF173) 0.02 Orthogroups_2024-Update
Sobic.010G255300.2 No alias protein involved in PS-II assembly *(HCF173) 0.04 Orthogroups_2024-Update
Solyc08g016080 No alias high chlorophyll fluorescence phenotype 173 (AHRD V3.3... 0.02 Orthogroups_2024-Update
Sopen08g006330 No alias NADH(P)-binding 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Predicted GO
MF GO:0008417 fucosyltransferase activity IEP Predicted GO
MF GO:0008716 D-alanine-D-alanine ligase activity IEP Predicted GO
MF GO:0009678 hydrogen-translocating pyrophosphatase activity IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0016881 acid-amino acid ligase activity IEP Predicted GO
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Predicted GO
BP GO:0042546 cell wall biogenesis IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
CC GO:0044430 cytoskeletal part IEP Predicted GO
InterPro domains Description Start Stop
IPR013857 NADH-UbQ_OxRdtase-assoc_prot30 247 377
IPR016040 NAD(P)-bd_dom 132 224
IPR016040 NAD(P)-bd_dom 445 512
No external refs found!