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  5. 186992

186992


Description : tubulin beta 8


Gene families : OG_42_0000212 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000212_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 186992
Cluster HCCA clusters: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
A4A49_64347 No alias tubulin beta-2 chain 0.03 Orthogroups_2024-Update
Bradi2g10970 No alias beta-6 tubulin 0.02 Orthogroups_2024-Update
Brara.B02782.1 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer 0.02 Orthogroups_2024-Update
Brara.D01772.1 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer 0.02 Orthogroups_2024-Update
Brara.F01786.1 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer 0.03 Orthogroups_2024-Update
Brara.F02178.1 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer 0.02 Orthogroups_2024-Update
Brara.H01049.1 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer 0.02 Orthogroups_2024-Update
Cre12.g549550 No alias tubulin beta chain 2 0.02 Orthogroups_2024-Update
Glyma.01G109300 No alias tubulin beta chain 3 0.03 Orthogroups_2024-Update
Glyma.08G081100 No alias tubulin beta-7 chain 0.02 Orthogroups_2024-Update
Kfl00215_0170 kfl00215_0170_v1.1 (p04690|tbb_chlre : 825.0) Tubulin beta-1/beta-2 chain -... 0.03 Orthogroups_2024-Update
MA_72744g0010 No alias (q40665|tbb3_orysa : 805.0) Tubulin beta-3 chain (Beta-3... 0.02 Orthogroups_2024-Update
Mp1g20730.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 Orthogroups_2024-Update
Mp2g09390.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 Orthogroups_2024-Update
Mp2g16780.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 Orthogroups_2024-Update
Potri.009G067100 No alias beta-6 tubulin 0.02 Orthogroups_2024-Update
Pp1s218_7V6 No alias tubulin beta 0.03 Orthogroups_2024-Update
Pp1s93_136V6 No alias tubulin beta 0.03 Orthogroups_2024-Update
Pp1s93_158V6 No alias tubulin beta 0.02 Orthogroups_2024-Update
Solyc03g025730 No alias Tubulin beta chain (AHRD V3.3 *** G7IAN2_MEDTR) 0.02 Orthogroups_2024-Update
Solyc12g089310 No alias Tubulin beta chain (AHRD V3.3 *** A0A0V0ICK0_SOLCH) 0.01 Orthogroups_2024-Update
evm.model.contig_2073.5 No alias (p37832|tbb7_orysa : 682.0) Tubulin beta-7 chain (Beta-7... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0003839 gamma-glutamylcyclotransferase activity IEP Predicted GO
MF GO:0004827 proline-tRNA ligase activity IEP Predicted GO
CC GO:0005741 mitochondrial outer membrane IEP Predicted GO
BP GO:0006270 DNA replication initiation IEP Predicted GO
BP GO:0006433 prolyl-tRNA aminoacylation IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006694 steroid biosynthetic process IEP Predicted GO
BP GO:0006749 glutathione metabolic process IEP Predicted GO
BP GO:0006751 glutathione catabolic process IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016842 amidine-lyase activity IEP Predicted GO
CC GO:0017119 Golgi transport complex IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
CC GO:0030126 COPI vesicle coat IEP Predicted GO
CC GO:0031968 organelle outer membrane IEP Predicted GO
BP GO:0042219 cellular modified amino acid catabolic process IEP Predicted GO
BP GO:0043171 peptide catabolic process IEP Predicted GO
BP GO:0044273 sulfur compound catabolic process IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
BP GO:0051187 cofactor catabolic process IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR018316 Tubulin/FtsZ_2-layer-sand-dom 261 382
IPR003008 Tubulin_FtsZ_GTPase 3 211
No external refs found!