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  5. Sopen01g018120

Sopen01g018120


Description : gag-polyprotein putative aspartyl protease


Gene families : OG_42_0001782 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001782_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen01g018120
Cluster HCCA clusters: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
Sopen01g018290 No alias Retrotransposon gag protein 0.03 Orthogroups_2024-Update
Sopen03g019780 No alias Retrotransposon gag protein 0.03 Orthogroups_2024-Update
Sopen07g019450 No alias hypothetical protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005162 Retrotrans_gag_dom 41 124
No external refs found!