1. Home
  2. Species
  3. Selaginella moellendorffii
  4. Sequence
  5. 227744

227744


Description : probable small nuclear ribonucleoprotein G


Gene families : OG_42_0003700 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003700_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 227744
Cluster HCCA clusters: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
At2g23930 No alias Probable small nuclear ribonucleoprotein G... 0.04 Orthogroups_2024-Update
Bradi4g35070 No alias probable small nuclear ribonucleoprotein G 0.02 Orthogroups_2024-Update
Brara.D01431.1 No alias component *(Sm-G) of U1/U2/U4/U5-associated Sm accessory... 0.03 Orthogroups_2024-Update
Glyma.03G197100 No alias probable small nuclear ribonucleoprotein G 0.03 Orthogroups_2024-Update
HORVU2Hr1G031890.2 No alias component *(Sm-G) of U1/U2/U4/U5-associated Sm accessory... 0.04 Orthogroups_2024-Update
MA_91807g0010 No alias (at2g23930 : 139.0) probable small nuclear... 0.02 Orthogroups_2024-Update
Mp4g07410.1 No alias component Sm-G of U1/U2/U4/U5-associated Sm accessory... 0.02 Orthogroups_2024-Update
PSME_00047756-RA No alias (at2g23930 : 101.0) probable small nuclear... 0.04 Orthogroups_2024-Update
PSME_00050600-RA No alias (at2g23930 : 102.0) probable small nuclear... 0.04 Orthogroups_2024-Update
Potri.006G211100 No alias Small nuclear ribonucleoprotein family protein 0.05 Orthogroups_2024-Update
Pp1s475_6V6 No alias small nuclear ribonucleoprotein g 0.03 Orthogroups_2024-Update
Seita.2G385800.1 No alias component *(Sm-G) of U1/U2/U4/U5-associated Sm accessory... 0.04 Orthogroups_2024-Update
Sobic.001G340500.1 No alias component *(Sm-G) of U1/U2/U4/U5-associated Sm accessory... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0004298 threonine-type endopeptidase activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
CC GO:0005741 mitochondrial outer membrane IEP Predicted GO
CC GO:0005758 mitochondrial intermembrane space IEP Predicted GO
CC GO:0005839 proteasome core complex IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0006801 superoxide metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0006825 copper ion transport IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0009966 regulation of signal transduction IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
BP GO:0010646 regulation of cell communication IEP Predicted GO
MF GO:0016530 metallochaperone activity IEP Predicted GO
MF GO:0016531 copper chaperone activity IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
BP GO:0023051 regulation of signaling IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
CC GO:0031968 organelle outer membrane IEP Predicted GO
CC GO:0031970 organelle envelope lumen IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044429 mitochondrial part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0048583 regulation of response to stimulus IEP Predicted GO
MF GO:0070003 threonine-type peptidase activity IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:0072593 reactive oxygen species metabolic process IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
MF GO:0140104 molecular carrier activity IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001163 LSM_dom_euk/arc 9 71
No external refs found!