1. Home
  2. Species
  3. Solanum pennellii
  4. Sequence
  5. Sopen01g018270

Sopen01g018270


Description : IBR domain


Gene families : OG_42_0000347 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000347_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen01g018270
Cluster HCCA clusters: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
A4A49_29230 No alias putative e3 ubiquitin-protein ligase ari8 0.03 Orthogroups_2024-Update
At1g05890 No alias RBR-type E3 ubiquitin transferase... 0.02 Orthogroups_2024-Update
At2g31780 No alias RING/U-box superfamily protein [Source:TAIR;Acc:AT2G31780] 0.03 Orthogroups_2024-Update
Glyma.13G343300 No alias IBR domain-containing protein 0.03 Orthogroups_2024-Update
HORVU4Hr1G066180.1 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Kfl00714_0020 kfl00714_0020_v1.1 (at1g65430 : 663.0) ARIADNE 8 (ARI8); FUNCTIONS IN:... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002867 IBR_dom 278 329
IPR002867 IBR_dom 198 260
No external refs found!