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  5. Sopen01g018290

Sopen01g018290


Description : Retrotransposon gag protein


Gene families : OG_42_0001782 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001782_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen01g018290
Cluster HCCA clusters: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
Sopen00g004260 No alias Retrotransposon gag protein 0.03 Orthogroups_2024-Update
Sopen01g018120 No alias gag-polyprotein putative aspartyl protease 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005162 Retrotrans_gag_dom 150 240
No external refs found!