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  5. 229918

229918


Description : SKU5 similar 4


Gene families : OG_42_0000592 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000592_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 229918
Cluster HCCA clusters: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
A4A49_40867 No alias l-ascorbate oxidase-like protein 0.03 Orthogroups_2024-Update
Bradi1g26470 No alias SKU5 similar 5 0.06 Orthogroups_2024-Update
Bradi1g32470 No alias SKU5 similar 5 0.04 Orthogroups_2024-Update
Brara.B02254.1 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.03 Orthogroups_2024-Update
Glyma.06G307100 No alias SKU5 similar 5 0.03 Orthogroups_2024-Update
Glyma.11G097300 No alias SKU5 similar 5 0.03 Orthogroups_2024-Update
Glyma.12G023300 No alias SKU5 similar 5 0.03 Orthogroups_2024-Update
Glyma.12G097700 No alias SKU5 similar 5 0.04 Orthogroups_2024-Update
MA_10254g0020 No alias (at4g22010 : 685.0) SKU5 similar 4 (sks4); FUNCTIONS... 0.04 Orthogroups_2024-Update
MA_161013g0010 No alias (at1g76160 : 735.0) SKU5 similar 5 (sks5); FUNCTIONS IN:... 0.02 Orthogroups_2024-Update
Potri.004G010100 No alias SKU5 similar 4 0.02 Orthogroups_2024-Update
Potri.005G247700 No alias SKU5 similar 5 0.02 Orthogroups_2024-Update
Potri.014G154500 No alias SKU5 similar 4 0.03 Orthogroups_2024-Update
Solyc02g080670 No alias L-ascorbate oxidase (AHRD V3.3 *** A0A0B0MPT8_GOSAR) 0.03 Orthogroups_2024-Update
Solyc02g090360 No alias L-ascorbate oxidase like (AHRD V3.3 *** A0A0B2RUS1_GLYSO) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEA InterProScan predictions
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Predicted GO
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004181 metallocarboxypeptidase activity IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006855 drug transmembrane transport IEP Predicted GO
MF GO:0008235 metalloexopeptidase activity IEP Predicted GO
BP GO:0009250 glucan biosynthetic process IEP Predicted GO
MF GO:0015238 drug transmembrane transporter activity IEP Predicted GO
BP GO:0015893 drug transport IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
MF GO:0035251 UDP-glucosyltransferase activity IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
BP GO:0051273 beta-glucan metabolic process IEP Predicted GO
BP GO:0051274 beta-glucan biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR011706 Cu-oxidase_2 405 513
IPR001117 Cu-oxidase 159 294
IPR011707 Cu-oxidase_3 36 145
No external refs found!