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  5. 230143

230143


Description : tubulin alpha-4 chain


Gene families : OG_42_0000484 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000484_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 230143
Cluster HCCA clusters: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
Bradi1g23770 No alias tubulin alpha-5 0.04 Orthogroups_2024-Update
Brara.E01685.1 No alias alpha-Tubulin component *(TUA) of alpha-beta-Tubulin heterodimer 0.03 Orthogroups_2024-Update
Brara.F00331.1 No alias alpha-Tubulin component *(TUA) of alpha-beta-Tubulin heterodimer 0.04 Orthogroups_2024-Update
Glyma.16G040100 No alias tubulin alpha-5 0.03 Orthogroups_2024-Update
Glyma.16G154000 No alias tubulin alpha-3 0.02 Orthogroups_2024-Update
MA_184192g0010 No alias (q6vaf9|tba4_goshi : 795.0) Tubulin alpha-4 chain... 0.03 Orthogroups_2024-Update
MA_93486g0010 No alias (at5g19780 : 800.0) Encodes an isoform of alpha tubulin.... 0.02 Orthogroups_2024-Update
Mp1g24530.1 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.03 Orthogroups_2024-Update
Mp2g23500.1 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.03 Orthogroups_2024-Update
PSME_00045033-RA No alias (at5g19780 : 802.0) Encodes an isoform of alpha tubulin.... 0.02 Orthogroups_2024-Update
Potri.002G111900 No alias tubulin alpha-2 chain 0.03 Orthogroups_2024-Update
Pp1s215_51V6 No alias alpha tubulin 1 0.02 Orthogroups_2024-Update
Pp1s70_210V6 No alias alpha tubulin 1 0.03 Orthogroups_2024-Update
Seita.9G110400.1 No alias alpha-Tubulin component *(TUA) of alpha-beta-Tubulin heterodimer 0.02 Orthogroups_2024-Update
Sopen00g003710 No alias Tubulin/FtsZ family, GTPase domain 0.02 Orthogroups_2024-Update
Sopen00g004560 No alias Tubulin/FtsZ family, GTPase domain 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003839 gamma-glutamylcyclotransferase activity IEP Predicted GO
MF GO:0004356 glutamate-ammonia ligase activity IEP Predicted GO
BP GO:0006486 protein glycosylation IEP Predicted GO
BP GO:0006541 glutamine metabolic process IEP Predicted GO
BP GO:0006542 glutamine biosynthetic process IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006749 glutathione metabolic process IEP Predicted GO
BP GO:0006751 glutathione catabolic process IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
MF GO:0016211 ammonia ligase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016842 amidine-lyase activity IEP Predicted GO
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Predicted GO
CC GO:0017119 Golgi transport complex IEP Predicted GO
BP GO:0042219 cellular modified amino acid catabolic process IEP Predicted GO
BP GO:0043171 peptide catabolic process IEP Predicted GO
BP GO:0043413 macromolecule glycosylation IEP Predicted GO
BP GO:0044273 sulfur compound catabolic process IEP Predicted GO
BP GO:0051187 cofactor catabolic process IEP Predicted GO
BP GO:0070085 glycosylation IEP Predicted GO
InterPro domains Description Start Stop
IPR003008 Tubulin_FtsZ_GTPase 3 213
IPR018316 Tubulin/FtsZ_2-layer-sand-dom 265 394
No external refs found!