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  5. 230202

230202


Description : expansin A2


Gene families : OG_42_0000014 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000014_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 230202
Cluster HCCA clusters: Cluster_190

Target Alias Description ECC score Gene Family Method Actions
179212 No alias expansin A15 0.04 Orthogroups_2024-Update
A4A49_20002 No alias expansin-a12 0.02 Orthogroups_2024-Update
A4A49_38718 No alias expansin-a7 0.02 Orthogroups_2024-Update
A4A49_40187 No alias expansin-a3 0.03 Orthogroups_2024-Update
Bradi2g53580 No alias expansin A8 0.03 Orthogroups_2024-Update
Glyma.18G038000 No alias Barwin-like endoglucanases superfamily protein 0.03 Orthogroups_2024-Update
LOC_Os03g06020 No alias expansin precursor, putative, expressed 0.02 Orthogroups_2024-Update
Mp3g09760.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
PSME_00037641-RA No alias (q852a1|expa7_orysa : 440.0) Expansin-A7 precursor... 0.03 Orthogroups_2024-Update
PSME_00050514-RA No alias (at2g40610 : 400.0) member of Alpha-Expansin Gene... 0.03 Orthogroups_2024-Update
Pp1s178_63V6 No alias alpha-expansin 1 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0008378 galactosyltransferase activity IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 63 152
IPR007117 Expansin_CBD 163 241
No external refs found!