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  4. Sequence
  5. 232016

232016


Description : serine hydroxymethyltransferase 3


Gene families : OG_42_0000626 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000626_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 232016
Cluster HCCA clusters: Cluster_172

Target Alias Description ECC score Gene Family Method Actions
Mp2g08370.1 No alias serine hydroxymethyltransferase 0.01 Orthogroups_2024-Update
PSME_00004358-RA No alias (at4g32520 : 524.0) Encodes a serine... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Predicted GO
CC GO:0000145 exocyst IEP Predicted GO
MF GO:0002161 aminoacyl-tRNA editing activity IEP Predicted GO
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0004399 histidinol dehydrogenase activity IEP Predicted GO
MF GO:0005048 signal sequence binding IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005886 plasma membrane IEP Predicted GO
BP GO:0006302 double-strand break repair IEP Predicted GO
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
BP GO:0006473 protein acetylation IEP Predicted GO
BP GO:0006474 N-terminal protein amino acid acetylation IEP Predicted GO
BP GO:0006547 histidine metabolic process IEP Predicted GO
BP GO:0006621 protein retention in ER lumen IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predicted GO
CC GO:0015934 large ribosomal subunit IEP Predicted GO
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
BP GO:0017196 N-terminal peptidyl-methionine acetylation IEP Predicted GO
BP GO:0018130 heterocycle biosynthetic process IEP Predicted GO
BP GO:0018206 peptidyl-methionine modification IEP Predicted GO
BP GO:0019438 aromatic compound biosynthetic process IEP Predicted GO
MF GO:0030145 manganese ion binding IEP Predicted GO
CC GO:0031248 protein acetyltransferase complex IEP Predicted GO
BP GO:0031365 N-terminal protein amino acid modification IEP Predicted GO
CC GO:0031414 N-terminal protein acetyltransferase complex IEP Predicted GO
CC GO:0031417 NatC complex IEP Predicted GO
BP GO:0032507 maintenance of protein location in cell IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
MF GO:0033218 amide binding IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Predicted GO
MF GO:0042277 peptide binding IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0043543 protein acylation IEP Predicted GO
CC GO:0044391 ribosomal subunit IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0045185 maintenance of protein location IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0046923 ER retention sequence binding IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051235 maintenance of location IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
BP GO:0051651 maintenance of location in cell IEP Predicted GO
BP GO:0052803 imidazole-containing compound metabolic process IEP Predicted GO
BP GO:0072595 maintenance of protein localization in organelle IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
MF GO:0140098 catalytic activity, acting on RNA IEP Predicted GO
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predicted GO
CC GO:1902493 acetyltransferase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR039429 SHMT-like_dom 1 384
No external refs found!