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  4. Sequence
  5. 234188

234188


Description : expansin B3


Gene families : OG_42_0000145 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000145_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 234188
Cluster HCCA clusters: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
HORVU0Hr1G016410.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc01g090810 No alias beta-expansin precursor 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004177 aminopeptidase activity IEP Predicted GO
MF GO:0004298 threonine-type endopeptidase activity IEP Predicted GO
MF GO:0004358 glutamate N-acetyltransferase activity IEP Predicted GO
MF GO:0005534 galactose binding IEP Predicted GO
CC GO:0005839 proteasome core complex IEP Predicted GO
BP GO:0006525 arginine metabolic process IEP Predicted GO
BP GO:0006526 arginine biosynthetic process IEP Predicted GO
MF GO:0008080 N-acetyltransferase activity IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
MF GO:0008373 sialyltransferase activity IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016410 N-acyltransferase activity IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
MF GO:0048029 monosaccharide binding IEP Predicted GO
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Predicted GO
MF GO:0070003 threonine-type peptidase activity IEP Predicted GO
BP GO:1901607 alpha-amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 161 241
IPR009009 RlpA-like_DPBB 68 148
No external refs found!