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  5. 25349

25349


Description : syntaxin of plants 124


Gene families : OG_42_0000336 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000336_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 25349
Cluster HCCA clusters: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
LOC_Os07g34510 No alias retrotransposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
Pp1s300_43V6 No alias qa-sso1 syntaxin1-syp12a-group 0.02 Orthogroups_2024-Update
Sobic.002G043300.2 No alias Qa-type SYP1-group component of SNARE membrane fusion complex 0.02 Orthogroups_2024-Update
Solyc10g081580 No alias Syntaxin (AHRD V3.3 *** A0F0A7_NICBE) 0.02 Orthogroups_2024-Update
Sopen10g032090 No alias SNARE domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
MF GO:0008509 anion transmembrane transporter activity IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
BP GO:0015689 molybdate ion transport IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
BP GO:0016049 cell growth IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
BP GO:0040007 growth IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000727 T_SNARE_dom 207 258
IPR006011 Syntaxin_N 2 206
No external refs found!