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  5. 25849

25849


Description : senescence-associated gene 29


Gene families : OG_42_0000052 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000052_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 25849
Cluster HCCA clusters: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
Bradi2g47540 No alias Nodulin MtN3 family protein 0.03 Orthogroups_2024-Update
Glyma.08G010000 No alias Nodulin MtN3 family protein 0.02 Orthogroups_2024-Update
LOC_Os01g40960 No alias nodulin MtN3 family protein, putative, expressed 0.02 Orthogroups_2024-Update
Seita.5G284900.1 No alias sugar efflux transporter *(SWEET) 0.04 Orthogroups_2024-Update
Solyc04g064640 No alias Bidirectional sugar transporter SWEET (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Sopen06g027680 No alias Sugar efflux transporter for intercellular exchange 0.02 Orthogroups_2024-Update
Sopen06g028970 No alias Sugar efflux transporter for intercellular exchange 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR004316 SWEET_sugar_transpr 121 204
IPR004316 SWEET_sugar_transpr 2 85
No external refs found!