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  5. 271198

271198


Description : polyubiquitin 10


Gene families : OG_42_0000048 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000048_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 271198
Cluster HCCA clusters: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
A4A49_13911 No alias polyubiquitin 10 0.03 Orthogroups_2024-Update
At1g55060 No alias Polyubiquitin 12 [Source:UniProtKB/Swiss-Prot;Acc:Q3E7K8] 0.02 Orthogroups_2024-Update
Bradi3g03957 No alias polyubiquitin 3 0.03 Orthogroups_2024-Update
Brara.E02153.1 No alias UBQ ubiquitin-fold protein 0.03 Orthogroups_2024-Update
HORVU6Hr1G014970.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU6Hr1G016150.3 No alias UBQ ubiquitin-fold protein 0.02 Orthogroups_2024-Update
HORVU6Hr1G021700.4 No alias UBQ ubiquitin-fold protein 0.02 Orthogroups_2024-Update
HORVU6Hr1G026280.2 No alias Unknown function 0.02 Orthogroups_2024-Update
Kfl00013_0170 kfl00013_0170_v1.... (at5g03240 : 108.0) encodes ubiquitin that is attached... 0.02 Orthogroups_2024-Update
Kfl00013_0180 kfl00013_0180_v1.... (at5g03240 : 138.0) encodes ubiquitin that is attached... 0.01 Orthogroups_2024-Update
Kfl00037_0290 kfl00037_0290_v1.1 (at4g05320 : 880.0) One of five polyubiquitin genes in... 0.02 Orthogroups_2024-Update
Kfl00272_g6 kfl00272_g6_v1.1 (at4g05320 : 751.0) One of five polyubiquitin genes in... 0.02 Orthogroups_2024-Update
MA_20231g0010 No alias (at5g03240 : 528.0) encodes ubiquitin that is attached... 0.02 Orthogroups_2024-Update
MA_8884419g0010 No alias (at3g62250 : 211.0) ubiquitin 5 (UBQ5); FUNCTIONS IN:... 0.03 Orthogroups_2024-Update
MA_94077g0010 No alias (at5g03240 : 515.0) encodes ubiquitin that is attached... 0.03 Orthogroups_2024-Update
Mp3g22950.1 No alias ubiquitin-fold protein (UBQ) 0.02 Orthogroups_2024-Update
Potri.017G036800 No alias polyubiquitin 10 0.02 Orthogroups_2024-Update
Pp1s100_236V6 No alias T8F5.13; polyubiquitin, putative [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Pp1s175_73V6 No alias polyubiquitin 0.02 Orthogroups_2024-Update
Pp1s4_496V6 No alias No description available 0.02 Orthogroups_2024-Update
Seita.3G398300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.4G253400.1 No alias UBQ ubiquitin-fold protein 0.03 Orthogroups_2024-Update
Seita.5G081000.1 No alias UBQ ubiquitin-fold protein 0.03 Orthogroups_2024-Update
Sobic.002G292500.1 No alias component *(eL40) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Sobic.003G403700.1 No alias UBQ ubiquitin-fold protein 0.02 Orthogroups_2024-Update
Sobic.004G049900.1 No alias UBQ ubiquitin-fold protein 0.03 Orthogroups_2024-Update
Sobic.010G225300.2 No alias UBQ ubiquitin-fold protein 0.02 Orthogroups_2024-Update
Sobic.010G239500.6 No alias UBQ ubiquitin-fold protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0008374 O-acyltransferase activity IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
BP GO:0009250 glucan biosynthetic process IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
MF GO:0015399 primary active transmembrane transporter activity IEP Predicted GO
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Predicted GO
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
BP GO:0040008 regulation of growth IEP Predicted GO
MF GO:0042623 ATPase activity, coupled IEP Predicted GO
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Predicted GO
BP GO:0045017 glycerolipid biosynthetic process IEP Predicted GO
BP GO:0045926 negative regulation of growth IEP Predicted GO
MF GO:0046422 violaxanthin de-epoxidase activity IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
BP GO:0051273 beta-glucan metabolic process IEP Predicted GO
BP GO:0051274 beta-glucan biosynthetic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000626 Ubiquitin_dom 3 74
IPR000626 Ubiquitin_dom 79 150
IPR000626 Ubiquitin_dom 307 378
IPR000626 Ubiquitin_dom 155 226
IPR000626 Ubiquitin_dom 231 302
No external refs found!