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  5. 31963

31963


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 31963
Cluster HCCA clusters: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
117959 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.05 Orthogroups_2024-Update
Bradi2g57140 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.01 Orthogroups_2024-Update
Brara.H00716.1 No alias Unknown function 0.04 Orthogroups_2024-Update
PSME_00025365-RA No alias (at3g49170 : 602.0) embryo defective 2261 (EMB2261);... 0.03 Orthogroups_2024-Update
Solyc04g082870 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.01 Orthogroups_2024-Update
Solyc11g040060 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 113 159
IPR002885 Pentatricopeptide_repeat 253 296
IPR002885 Pentatricopeptide_repeat 326 352
IPR002885 Pentatricopeptide_repeat 354 382
IPR002885 Pentatricopeptide_repeat 14 43
IPR002885 Pentatricopeptide_repeat 389 416
IPR002885 Pentatricopeptide_repeat 427 450
IPR002885 Pentatricopeptide_repeat 227 252
No external refs found!