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  4. Sequence
  5. 33898

33898


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 33898
Cluster HCCA clusters: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
Brara.B00112.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Pp1s169_110V6 No alias T12J13.14; pentatricopeptide (PPR) repeat-containing... 0.01 Orthogroups_2024-Update
Seita.1G077500.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005811 lipid droplet IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
CC GO:0012511 monolayer-surrounded lipid storage body IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 106 155
IPR002885 Pentatricopeptide_repeat 180 207
IPR002885 Pentatricopeptide_repeat 283 307
IPR002885 Pentatricopeptide_repeat 211 241
IPR002885 Pentatricopeptide_repeat 45 73
No external refs found!