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  5. Sopen01g021020

Sopen01g021020


Description : Transposase family tnp2


Gene families : OG_42_0000101 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen01g021020
Cluster HCCA clusters: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
LOC_Os10g27140 No alias transposon protein, putative, CACTA, En/Spm sub-class, expressed 0.03 Orthogroups_2024-Update
Solyc10g055380 No alias No description available 0.03 Orthogroups_2024-Update
Sopen05g023540 No alias Transposase family tnp2 0.03 Orthogroups_2024-Update
Sopen07g010120 No alias Transposase-associated domain 0.04 Orthogroups_2024-Update
Sopen07g016840 No alias Transposase family tnp2 0.04 Orthogroups_2024-Update
Sopen08g011050 No alias Transposase-associated domain 0.02 Orthogroups_2024-Update
Sopen11g015220 No alias Transposase family tnp2 0.03 Orthogroups_2024-Update
Sopen11g015850 No alias Transposase family tnp2 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004242 Transposase_21 183 300
IPR029480 Transpos_assoc 88 161
No external refs found!