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  5. Sopen01g021780

Sopen01g021780


Description : Pectinesterase


Gene families : OG_42_0000066 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000066_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen01g021780
Cluster HCCA clusters: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
Brara.D02731.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.02 Orthogroups_2024-Update
Brara.I03256.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.03 Orthogroups_2024-Update
Glyma.02G008400 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Orthogroups_2024-Update
PSME_00029101-RA No alias (at1g53830 : 536.0) encodes a pectin methylesterase;... 0.03 Orthogroups_2024-Update
Seita.5G344400.1 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
Sobic.002G251600.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.02 Orthogroups_2024-Update
Solyc07g064170 No alias pectin esterase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEA InterProScan predictions
MF GO:0030599 pectinesterase activity IEA InterProScan predictions
BP GO:0042545 cell wall modification IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006501 Pectinesterase_inhib_dom 50 198
IPR000070 Pectinesterase_cat 272 569
No external refs found!