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  5. Solyc01g106790

Solyc01g106790


Description : Tubulin alpha-6 chain, putative (AHRD V3.3 *** A0A072VQC5_MEDTR)


Gene families : OG_42_0008001 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008001_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g106790
Cluster HCCA clusters: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
At1g50020 No alias F2J10.10 protein [Source:UniProtKB/TrEMBL;Acc:Q9LPM3] 0.04 Orthogroups_2024-Update
Bradi4g16510 No alias Function unknown 0.04 Orthogroups_2024-Update
Glyma.10G255200 No alias Function unknown 0.05 Orthogroups_2024-Update
Glyma.20G136100 No alias Function unknown 0.06 Orthogroups_2024-Update
LOC_Os11g34870 No alias expressed protein 0.05 Orthogroups_2024-Update
Potri.001G289400 No alias Function unknown 0.03 Orthogroups_2024-Update
Potri.009G084800 No alias Function unknown 0.03 Orthogroups_2024-Update
Seita.8G148600.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Sobic.005G149700.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sopen01g049100 No alias hypothetical protein 0.15 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Predicted GO
BP GO:0015693 magnesium ion transport IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
MF GO:0016987 sigma factor activity IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
MF GO:0030151 molybdenum ion binding IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
BP GO:0042126 nitrate metabolic process IEP Predicted GO
BP GO:0042128 nitrate assimilation IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051205 protein insertion into membrane IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0070838 divalent metal ion transport IEP Predicted GO
BP GO:0071941 nitrogen cycle metabolic process IEP Predicted GO
BP GO:0072511 divalent inorganic cation transport IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
BP GO:2001057 reactive nitrogen species metabolic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!