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  5. 409925

409925


Description : Lateral root primordium (LRP) protein-related


Gene families : OG_42_0000655 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000655_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 409925
Cluster HCCA clusters: Cluster_152

Target Alias Description ECC score Gene Family Method Actions
Bradi2g61120 No alias Lateral root primordium (LRP) protein-related 0.03 Orthogroups_2024-Update
Brara.B00452.1 No alias SRS-type transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G108798 No alias Lateral root primordium (LRP) protein-related 0.06 Orthogroups_2024-Update
Glyma.04G136700 No alias Lateral root primordium (LRP) protein-related 0.03 Orthogroups_2024-Update
Glyma.06G027500 No alias SHI-related sequence 5 0.02 Orthogroups_2024-Update
Glyma.11G072500 No alias SHI-related sequence 5 0.02 Orthogroups_2024-Update
Potri.001G027700 No alias Lateral root primordium (LRP) protein-related 0.02 Orthogroups_2024-Update
Solyc01g110140 No alias Calcium-transporting ATPase (AHRD V3.3 --* A0A0J8EL09_BETVU) 0.02 Orthogroups_2024-Update
Sopen04g034580 No alias Domain of unknown function (DUF702) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!