410515

Description : ATP binding cassette subfamily B19

Gene families : OG_42_0000040 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000040_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Selaginella: 410515
Cluster	HCCA clusters: Cluster_14

Target	Alias	Description	ECC score	Gene Family Method
At3g28360	No alias	ABC transporter B family member 16...	0.02	Orthogroups_2024-Update
Bradi2g47400	No alias	ATP binding cassette subfamily B4	0.01	Orthogroups_2024-Update
Brara.F03123.1	No alias	auxin efflux transporter *(ABCB19) & subfamily ABCB transporter	0.02	Orthogroups_2024-Update
GRMZM2G333183	No alias	ATP binding cassette subfamily B1	0.03	Orthogroups_2024-Update
Glyma.13G118900	No alias	P-glycoprotein 11	0.05	Orthogroups_2024-Update
Glyma.19G016600	No alias	ABC transporter family protein	0.02	Orthogroups_2024-Update
LOC_Os01g34970	No alias	MDR-like ABC transporter, putative, expressed	0.02	Orthogroups_2024-Update
Mp7g16060.1	No alias	subfamily ABCB transporter	0.02	Orthogroups_2024-Update
PSME_00006521-RA	No alias	(at3g28345 : 1427.0) ABC transporter family protein;...	0.02	Orthogroups_2024-Update
PSME_00015427-RA	No alias	(at3g28345 : 1293.0) ABC transporter family protein;...	0.02	Orthogroups_2024-Update
PSME_00016535-RA	No alias	(at3g28860 : 1775.0) Belongs to the family of...	0.04	Orthogroups_2024-Update
PSME_00030919-RA	No alias	(at3g28345 : 696.0) ABC transporter family protein;...	0.02	Orthogroups_2024-Update
Potri.018G141400	No alias	ABC transporter family protein	0.02	Orthogroups_2024-Update
Seita.1G055700.1	No alias	subfamily ABCB transporter	0.02	Orthogroups_2024-Update
Seita.7G123300.1	No alias	auxin efflux transporter *(ABCB19) & subfamily ABCB transporter	0.02	Orthogroups_2024-Update
Sobic.004G174600.1	No alias	subfamily ABCB transporter	0.03	Orthogroups_2024-Update
Sobic.007G163800.1	No alias	subfamily ABCB transporter	0.02	Orthogroups_2024-Update
Sopen04g005490	No alias	ABC transporter transmembrane region	0.04	Orthogroups_2024-Update
Sopen12g033620	No alias	ABC transporter transmembrane region	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	InterProScan predictions
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0015405	P-P-bond-hydrolysis-driven transmembrane transporter activity	None	Extended
CC	GO:0016021	integral component of membrane	IEA	InterProScan predictions
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	InterProScan predictions
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042623	ATPase activity, coupled	None	Extended
MF	GO:0042626	ATPase activity, coupled to transmembrane movement of substances	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043492	ATPase activity, coupled to movement of substances	None	Extended
CC	GO:0044425	membrane part	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000272	polysaccharide catabolic process	IEP	Predicted GO
MF	GO:0003779	actin binding	IEP	Predicted GO
MF	GO:0005199	structural constituent of cell wall	IEP	Predicted GO
BP	GO:0006979	response to oxidative stress	IEP	Predicted GO
BP	GO:0009664	plant-type cell wall organization	IEP	Predicted GO
MF	GO:0016160	amylase activity	IEP	Predicted GO
MF	GO:0016161	beta-amylase activity	IEP	Predicted GO
BP	GO:0016226	iron-sulfur cluster assembly	IEP	Predicted GO
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	Predicted GO
BP	GO:0030258	lipid modification	IEP	Predicted GO
BP	GO:0030259	lipid glycosylation	IEP	Predicted GO
MF	GO:0030674	protein binding, bridging	IEP	Predicted GO
BP	GO:0031163	metallo-sulfur cluster assembly	IEP	Predicted GO
BP	GO:0044255	cellular lipid metabolic process	IEP	Predicted GO
MF	GO:0044877	protein-containing complex binding	IEP	Predicted GO
MF	GO:0048037	cofactor binding	IEP	Predicted GO
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	Predicted GO
MF	GO:0051015	actin filament binding	IEP	Predicted GO
MF	GO:0060090	molecular adaptor activity	IEP	Predicted GO
BP	GO:0071669	plant-type cell wall organization or biogenesis	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like	364	513
IPR003439	ABC_transporter-like	1002	1149
IPR011527	ABC1_TM_dom	84	296
IPR011527	ABC1_TM_dom	660	931

External Links

No external refs found!

410515

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation