Sopen01g023220

Description : HECT-domain (ubiquitin-transferase)

Gene families : OG_42_0004037 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004037_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen01g023220
Cluster	HCCA clusters: Cluster_122

Target	Alias	Description	ECC score	Gene Family Method
Kfl00615_0070	kfl00615_0070_v1.1	(at3g17205 : 655.0) ubiquitin protein ligase 6 (UPL6);...	0.03	Orthogroups_2024-Update
Pp1s173_137V6	No alias	upl6 (ubiquitin protein ligase 6) ubiquitin-protein ligase	0.02	Orthogroups_2024-Update
Seita.7G270000.1	No alias	E3 ubiquitin ligase *(UPL6)	0.03	Orthogroups_2024-Update
Sobic.009G053900.1	No alias	E3 ubiquitin ligase *(UPL6)	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	InterProScan predictions
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000569	HECT_dom	725	1030

External Links

No external refs found!