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  5. Sopen01g023670

Sopen01g023670


Description : PPR repeat family


Gene families : OG_42_0004106 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004106_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen01g023670
Cluster HCCA clusters: Cluster_257

Target Alias Description ECC score Gene Family Method Actions
HORVU1Hr1G016190.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.5G265700.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 421 469
IPR002885 Pentatricopeptide_repeat 527 575
IPR002885 Pentatricopeptide_repeat 246 294
IPR002885 Pentatricopeptide_repeat 351 400
IPR002885 Pentatricopeptide_repeat 146 195
IPR002885 Pentatricopeptide_repeat 585 640
IPR002885 Pentatricopeptide_repeat 320 349
IPR002885 Pentatricopeptide_repeat 488 520
IPR002885 Pentatricopeptide_repeat 214 240
No external refs found!