Solyc01g106980

Description : Endo-1,4-beta-xylanase C (AHRD V3.3 *** A0A199V4M1_ANACO)

Gene families : OG_42_0000885 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000885_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc01g106980
Cluster	HCCA clusters: Cluster_304

Target	Alias	Description	ECC score	Gene Family Method
A4A49_26378	No alias	hypothetical protein	0.02	Orthogroups_2024-Update
At4g33810	No alias	Glycosyl hydrolase superfamily protein...	0.03	Orthogroups_2024-Update
Sobic.001G439400.1	No alias	Unknown function	0.01	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEA	InterProScan predictions
BP	GO:0005975	carbohydrate metabolic process	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0008131	primary amine oxidase activity	IEP	Predicted GO
MF	GO:0016641	oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001000	GH10	750	1005
IPR001000	GH10	191	447

External Links

No external refs found!