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  5. 414740

414740


Description : RNA helicase family protein


Gene families : OG_42_0000210 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000210_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 414740
Cluster HCCA clusters: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
Brara.B00468.1 No alias RNA helicase *(Prp16) 0.02 Orthogroups_2024-Update
Seita.1G136100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G174200.1 No alias RNA helicase *(Prp2) 0.02 Orthogroups_2024-Update
Solyc01g079250 No alias RNA helicase DEAH-box2 0.03 Orthogroups_2024-Update
Sopen01g053030 No alias Oligonucleotide/oligosaccharide-binding (OB)-fold 0.02 Orthogroups_2024-Update
evm.model.contig_450.3 No alias (at3g62310 : 264.0) RNA helicase family protein;... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0004386 helicase activity IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
CC GO:0016021 integral component of membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004096 catalase activity IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
InterPro domains Description Start Stop
IPR007502 Helicase-assoc_dom 415 504
IPR011701 MFS 678 1030
IPR001650 Helicase_C 243 353
IPR011545 DEAD/DEAH_box_helicase_dom 45 202
IPR011709 DUF1605 574 653
No external refs found!