1. Home
  2. Species
  3. Solanum pennellii
  4. Sequence
  5. Sopen01g024920

Sopen01g024920


Description : Reverse transcriptase (RNA-dependent DNA polymerase)


Gene families : OG_42_0000004 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen01g024920
Cluster HCCA clusters: Cluster_169

Target Alias Description ECC score Gene Family Method Actions
HORVU0Hr1G014810.2 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU0Hr1G039350.2 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU6Hr1G002090.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU6Hr1G084730.1 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os04g51430 No alias retrotransposon protein, putative, unclassified, expressed 0.03 Orthogroups_2024-Update
Sopen01g030720 No alias Retroviral aspartyl protease 0.03 Orthogroups_2024-Update
Sopen08g004730 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.02 Orthogroups_2024-Update
Sopen11g023740 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.03 Orthogroups_2024-Update
evm.model.tig00021758.17 No alias (p31843|rrpo_oenbe : 98.2) RNA-directed DNA polymerase... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000477 RT_dom 651 810
IPR005162 Retrotrans_gag_dom 114 210
No external refs found!