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  5. 419538

419538


Description : beta-amylase 2


Gene families : OG_42_0000277 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000277_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 419538
Cluster HCCA clusters: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
A4A49_03670 No alias beta-amylase 2, chloroplastic 0.03 Orthogroups_2024-Update
Bradi4g38630 No alias beta-amylase 7 0.02 Orthogroups_2024-Update
Glyma.01G203400 No alias chloroplast beta-amylase 0.03 Orthogroups_2024-Update
Glyma.08G025500 No alias beta-amylase 1 0.05 Orthogroups_2024-Update
Glyma.13G215000 No alias beta-amylase 3 0.03 Orthogroups_2024-Update
Glyma.15G098100 No alias beta-amylase 3 0.03 Orthogroups_2024-Update
Kfl00034_0040 kfl00034_0040_v1.1 (at3g23920 : 514.0) Encodes a chloroplast beta-amylase.... 0.01 Orthogroups_2024-Update
Kfl00337_0020 kfl00337_0020_v1.1 (o22585|amyb_medsa : 538.0) Beta-amylase (EC 3.2.1.2)... 0.03 Orthogroups_2024-Update
MA_10432630g0020 No alias (at3g23920 : 519.0) Encodes a chloroplast beta-amylase.... 0.02 Orthogroups_2024-Update
MA_9635863g0020 No alias (at5g18670 : 125.0) putative beta-amylase BMY3 (BMY3);... 0.03 Orthogroups_2024-Update
Mp4g04500.1 No alias beta amylase 0.02 Orthogroups_2024-Update
PSME_00017705-RA No alias (at4g17090 : 655.0) Encodes a beta-amylase targeted to... 0.04 Orthogroups_2024-Update
Pp1s16_320V6 No alias bam2 (beta-amylase 2) beta-amylase 0.02 Orthogroups_2024-Update
Pp1s233_4V6 No alias F14O13.12; beta-amylase, putative / 1,4-alpha-D-glucan... 0.02 Orthogroups_2024-Update
Pp1s9_318V6 No alias beta-amylase 0.02 Orthogroups_2024-Update
Sopen01g029610 No alias Glycosyl hydrolase family 14 0.02 Orthogroups_2024-Update
evm.model.tig00000254.59 No alias (p16098|amyb_horvu : 219.0) Beta-amylase (EC 3.2.1.2)... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEA InterProScan predictions
MF GO:0016161 beta-amylase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001554 Glyco_hydro_14 82 482
No external refs found!