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  5. 420581

420581


Description : Function unknown


Gene families : OG_42_0001462 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001462_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 420581
Cluster HCCA clusters: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
178549 No alias Function unknown 0.02 Orthogroups_2024-Update
At1g35780 No alias At1g35780/F14D7_9 [Source:UniProtKB/TrEMBL;Acc:Q9LP18] 0.03 Orthogroups_2024-Update
At4g39860 No alias Hematological/neurological-like protein... 0.02 Orthogroups_2024-Update
Bradi3g46657 No alias Function unknown 0.07 Orthogroups_2024-Update
Brara.E01825.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.11G240000 No alias Function unknown 0.01 Orthogroups_2024-Update
HORVU2Hr1G079780.3 No alias Unknown function 0.02 Orthogroups_2024-Update
Kfl00138_0050 kfl00138_0050_v1.1 (at1g78150 : 99.8) unknown protein; FUNCTIONS IN:... 0.02 Orthogroups_2024-Update
LOC_Os04g38310 No alias expressed protein 0.02 Orthogroups_2024-Update
MA_10431601g0020 No alias (at4g39860 : 259.0) unknown protein; BEST Arabidopsis... 0.02 Orthogroups_2024-Update
Potri.005G076000 No alias Function unknown 0.02 Orthogroups_2024-Update
Potri.007G092400 No alias Function unknown 0.01 Orthogroups_2024-Update
Seita.9G380800.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Sobic.009G079950.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Solyc04g055160 No alias N-lysine methyltransferase (AHRD V3.3 *** AT1G78150.2) 0.01 Orthogroups_2024-Update
Solyc04g073970 No alias N-lysine methyltransferase (AHRD V3.3 *** AT1G78150.3) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
CC GO:0005730 nucleolus IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
BP GO:0030490 maturation of SSU-rRNA IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
CC GO:0030686 90S preribosome IEP Predicted GO
CC GO:0030688 preribosome, small subunit precursor IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR025131 DUF4057 241 366
IPR025131 DUF4057 49 131
IPR025131 DUF4057 138 207
No external refs found!