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  4. Sequence
  5. 420919

420919


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_42_0005123 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005123_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 420919
Cluster HCCA clusters: Cluster_105


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0004133 glycogen debranching enzyme activity IEP Predicted GO
MF GO:0004134 4-alpha-glucanotransferase activity IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR019083 IGR_protein_motif 582 637
IPR002885 Pentatricopeptide_repeat 87 108
IPR002885 Pentatricopeptide_repeat 8 30
IPR002885 Pentatricopeptide_repeat 321 342
IPR002885 Pentatricopeptide_repeat 380 408
IPR002885 Pentatricopeptide_repeat 216 257
IPR002885 Pentatricopeptide_repeat 115 153
IPR002885 Pentatricopeptide_repeat 481 528
No external refs found!