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  5. Sopen01g026220

Sopen01g026220


Description : WD domain, G-beta repeat


Gene families : OG_42_0003953 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003953_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen01g026220
Cluster HCCA clusters: Cluster_253

Target Alias Description ECC score Gene Family Method Actions
Cre02.g078150 No alias WD40/YVTN repeat-like-containing domain;Bromodomain 0.02 Orthogroups_2024-Update
Glyma.15G142600 No alias WD40/YVTN repeat-like-containing domain;Bromodomain 0.03 Orthogroups_2024-Update
Seita.9G430500.1 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase complex 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001487 Bromodomain 1629 1676
IPR001680 WD40_repeat 386 417
IPR001680 WD40_repeat 274 309
IPR001680 WD40_repeat 231 268
IPR001680 WD40_repeat 316 355
IPR001680 WD40_repeat 569 608
No external refs found!