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  5. 423144

423144


Description : photosystem I light harvesting complex gene 1


Gene families : OG_42_0000070 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000070_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 423144
Cluster HCCA clusters: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
A4A49_03871 No alias chlorophyll a-b binding protein 36, chloroplastic 0.04 Orthogroups_2024-Update
A4A49_12650 No alias chlorophyll a-b binding protein 6a, chloroplastic 0.04 Orthogroups_2024-Update
A4A49_14365 No alias chlorophyll a-b binding protein 21, chloroplastic 0.04 Orthogroups_2024-Update
A4A49_24464 No alias chlorophyll a-b binding protein 36, chloroplastic 0.05 Orthogroups_2024-Update
A4A49_33198 No alias chlorophyll a-b binding protein p4, chloroplastic 0.06 Orthogroups_2024-Update
A4A49_60962 No alias chlorophyll a-b binding protein 50, chloroplastic 0.03 Orthogroups_2024-Update
A4A49_61087 No alias chlorophyll a-b binding protein 50, chloroplastic 0.02 Orthogroups_2024-Update
A4A49_64136 No alias chlorophyll a-b binding protein 13, chloroplastic 0.04 Orthogroups_2024-Update
AC207722.2_FG009 No alias photosystem II light harvesting complex gene B1B2 0.02 Orthogroups_2024-Update
Bradi1g23610 No alias photosystem I light harvesting complex gene 2 0.02 Orthogroups_2024-Update
Bradi1g42670 No alias photosystem I light harvesting complex gene 1 0.04 Orthogroups_2024-Update
Bradi2g16282 No alias photosystem II light harvesting complex gene B1B2 0.03 Orthogroups_2024-Update
Bradi2g16290 No alias photosystem II light harvesting complex gene B1B2 0.04 Orthogroups_2024-Update
Bradi3g36760 No alias light-harvesting chlorophyll-protein complex I subunit A4 0.02 Orthogroups_2024-Update
Bradi3g58020 No alias photosystem I light harvesting complex gene 5 0.02 Orthogroups_2024-Update
Bradi4g07380 No alias chlorophyll A/B binding protein 1 0.03 Orthogroups_2024-Update
Bradi4g30060 No alias light-harvesting chlorophyll-protein complex I subunit A4 0.03 Orthogroups_2024-Update
Bradi4g31257 No alias photosystem I light harvesting complex gene 6 0.02 Orthogroups_2024-Update
Bradi4g37210 No alias photosystem II light harvesting complex gene B1B2 0.04 Orthogroups_2024-Update
Brara.B01393.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.C01741.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.02 Orthogroups_2024-Update
Brara.C02638.1 No alias component *(LHCb5) of LHC-II complex 0.02 Orthogroups_2024-Update
Brara.D00100.1 No alias component *(LHCa2) of LHC-I complex 0.03 Orthogroups_2024-Update
Brara.E00982.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.03 Orthogroups_2024-Update
Brara.F01756.1 No alias component *(LHCa4) of LHC-I complex 0.03 Orthogroups_2024-Update
Brara.G01647.1 No alias component *(LHCa1) of LHC-I complex 0.03 Orthogroups_2024-Update
Brara.G01921.1 No alias component *(LHCa2) of LHC-I complex 0.03 Orthogroups_2024-Update
Brara.H01921.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.02 Orthogroups_2024-Update
Brara.I02856.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.03 Orthogroups_2024-Update
Brara.I02857.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.03 Orthogroups_2024-Update
Brara.J00907.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.02 Orthogroups_2024-Update
Cre06.g272650 No alias photosystem I light harvesting complex gene 5 0.02 Orthogroups_2024-Update
Cre06.g278213 No alias light-harvesting chlorophyll-protein complex I subunit A4 0.02 Orthogroups_2024-Update
Cre06.g283050 No alias photosystem I light harvesting complex gene 1 0.02 Orthogroups_2024-Update
Cre06.g285250 No alias photosystem II light harvesting complex gene 2.1 0.02 Orthogroups_2024-Update
Cre07.g344950 No alias photosystem I light harvesting complex gene 5 0.02 Orthogroups_2024-Update
Cre10.g425900 No alias light-harvesting chlorophyll-protein complex I subunit A4 0.02 Orthogroups_2024-Update
Cre10.g452050 No alias light-harvesting chlorophyll-protein complex I subunit A4 0.02 Orthogroups_2024-Update
Cre12.g508750 No alias photosystem I light harvesting complex gene 6 0.02 Orthogroups_2024-Update
Cre16.g673650 No alias light harvesting complex of photosystem II 5 0.02 Orthogroups_2024-Update
Cre16.g687900 No alias photosystem I light harvesting complex gene 5 0.02 Orthogroups_2024-Update
GRMZM2G072280 No alias photosystem I light harvesting complex gene 2 0.02 Orthogroups_2024-Update
GRMZM2G160268 No alias light-harvesting chlorophyll-protein complex I subunit A4 0.02 Orthogroups_2024-Update
Glyma.02G064700 No alias photosystem I light harvesting complex gene 1 0.02 Orthogroups_2024-Update
Glyma.02G305400 No alias photosystem II light harvesting complex gene 2.1 0.03 Orthogroups_2024-Update
Glyma.03G262300 No alias photosystem I light harvesting complex gene 2 0.03 Orthogroups_2024-Update
Glyma.04G167900 No alias light-harvesting chlorophyll-protein complex I subunit A4 0.03 Orthogroups_2024-Update
Glyma.06G194900 No alias light-harvesting chlorophyll-protein complex I subunit A4 0.03 Orthogroups_2024-Update
Glyma.07G047600 No alias photosystem I light harvesting complex gene 2 0.03 Orthogroups_2024-Update
Glyma.08G082900 No alias chlorophyll A/B binding protein 1 0.02 Orthogroups_2024-Update
Glyma.09G154700 No alias light harvesting complex of photosystem II 5 0.03 Orthogroups_2024-Update
Glyma.10G177200 No alias light harvesting complex of photosystem II 5 0.03 Orthogroups_2024-Update
Glyma.12G219300 No alias light-harvesting chlorophyll B-binding protein 3 0.03 Orthogroups_2024-Update
Glyma.13G282000 No alias light-harvesting chlorophyll B-binding protein 3 0.03 Orthogroups_2024-Update
Glyma.14G008000 No alias photosystem II light harvesting complex gene 2.1 0.03 Orthogroups_2024-Update
Glyma.16G016100 No alias photosystem I light harvesting complex gene 2 0.03 Orthogroups_2024-Update
Glyma.16G145800 No alias photosystem I light harvesting complex gene 1 0.03 Orthogroups_2024-Update
Glyma.16G205200 No alias light harvesting complex of photosystem II 5 0.03 Orthogroups_2024-Update
Glyma.20G212900 No alias light harvesting complex of photosystem II 5 0.03 Orthogroups_2024-Update
HORVU1Hr1G078380.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.03 Orthogroups_2024-Update
HORVU1Hr1G088870.2 No alias component *(LHCb1/2/3) of LHC-II complex 0.02 Orthogroups_2024-Update
HORVU1Hr1G088900.2 No alias component *(LHCb1/2/3) of LHC-II complex 0.02 Orthogroups_2024-Update
HORVU1Hr1G088920.3 No alias component *(LHCb1/2/3) of LHC-II complex 0.02 Orthogroups_2024-Update
HORVU1Hr1G089180.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.03 Orthogroups_2024-Update
HORVU2Hr1G036960.9 No alias component *(LHCa2) of LHC-I complex 0.03 Orthogroups_2024-Update
HORVU4Hr1G015260.2 No alias component *(LHCb5) of LHC-II complex 0.03 Orthogroups_2024-Update
HORVU5Hr1G082420.2 No alias component *(LHCb1/2/3) of LHC-II complex 0.03 Orthogroups_2024-Update
HORVU5Hr1G087250.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.03 Orthogroups_2024-Update
HORVU5Hr1G109250.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.03 Orthogroups_2024-Update
HORVU5Hr1G109260.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.04 Orthogroups_2024-Update
HORVU5Hr1G109360.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.03 Orthogroups_2024-Update
HORVU5Hr1G124160.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.03 Orthogroups_2024-Update
HORVU6Hr1G016850.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.03 Orthogroups_2024-Update
HORVU6Hr1G016890.6 No alias component *(LHCb1/2/3) of LHC-II complex 0.03 Orthogroups_2024-Update
HORVU6Hr1G016940.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.02 Orthogroups_2024-Update
HORVU6Hr1G091660.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.03 Orthogroups_2024-Update
HORVU7Hr1G040380.5 No alias component *(LHCb1/2/3) of LHC-II complex 0.03 Orthogroups_2024-Update
HORVU7Hr1G046320.1 No alias component *(LHCa1) of LHC-I complex 0.03 Orthogroups_2024-Update
HORVU7Hr1G058120.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.03 Orthogroups_2024-Update
Kfl00009_0500 kfl00009_0500_v1.... (p13869|cb12_pethy : 139.0) Chlorophyll a-b binding... 0.06 Orthogroups_2024-Update
Kfl00009_0510 kfl00009_0510_v1.1 (at3g54890 : 130.0) Encodes a component of the light... 0.06 Orthogroups_2024-Update
Kfl00023_0070 kfl00023_0070_v1.1 (at3g47470 : 285.0) Encodes a chlorophyll a/b-binding... 0.03 Orthogroups_2024-Update
Kfl00104_0350 kfl00104_0350_v1.1 (at4g10340 : 325.0) photosystem II encoding the... 0.04 Orthogroups_2024-Update
Kfl00564_0030 kfl00564_0030_v1.1 (p13869|cb12_pethy : 291.0) Chlorophyll a-b binding... 0.03 Orthogroups_2024-Update
LOC_Os01g41710 No alias chlorophyll A-B binding protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os01g52240 No alias chlorophyll A-B binding protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g52650 No alias chlorophyll A-B binding protein, putative, expressed 0.02 Orthogroups_2024-Update
Mp7g05880.1 No alias component LHCb1/2/3 of LHC-II complex 0.02 Orthogroups_2024-Update
Mp7g05980.1 No alias component LHCb1/2/3 of LHC-II complex 0.02 Orthogroups_2024-Update
Mp7g06730.1 No alias component LHCb1/2/3 of LHC-II complex 0.03 Orthogroups_2024-Update
Mp7g06760.1 No alias component LHCb1/2/3 of LHC-II complex 0.02 Orthogroups_2024-Update
Mp7g06780.1 No alias component LHCb1/2/3 of LHC-II complex 0.02 Orthogroups_2024-Update
Mp7g08940.1 No alias component LHCb1/2/3 of LHC-II complex 0.02 Orthogroups_2024-Update
Potri.002G221400 No alias photosystem II light harvesting complex gene 2.2 0.02 Orthogroups_2024-Update
Potri.003G020400 No alias light harvesting complex photosystem II subunit 6 0.02 Orthogroups_2024-Update
Potri.005G239200 No alias light-harvesting chlorophyll-protein complex II subunit B1 0.03 Orthogroups_2024-Update
Potri.005G239300 No alias light-harvesting chlorophyll-protein complex II subunit B1 0.06 Orthogroups_2024-Update
Potri.014G029700 No alias photosystem I light harvesting complex gene 5 0.02 Orthogroups_2024-Update
Potri.014G165100 No alias photosystem II light harvesting complex gene 2.1 0.02 Orthogroups_2024-Update
Pp1s12_390V6 No alias chlorophyll a b binding 0.04 Orthogroups_2024-Update
Pp1s158_109V6 No alias chlorophyll a-b binding protein 6a 0.03 Orthogroups_2024-Update
Pp1s161_32V6 No alias lhca1.2 gene for putative chlorophyll a-b binding protein Lhca1.2 0.03 Orthogroups_2024-Update
Pp1s177_13V6 No alias chlorophyll a b binding 0.02 Orthogroups_2024-Update
Pp1s182_81V6 No alias chlorophyll a b binding 0.02 Orthogroups_2024-Update
Pp1s19_13V6 No alias light-harvesting complex ii protein lhcb2 0.02 Orthogroups_2024-Update
Pp1s1_625V6 No alias chlorophyll a b binding 0.02 Orthogroups_2024-Update
Pp1s241_66V6 No alias chlorophyll a-b binding protein 0.03 Orthogroups_2024-Update
Pp1s247_7V6 No alias chlorophyll a-b binding protein 6a 0.03 Orthogroups_2024-Update
Pp1s254_3V6 No alias light-harvesting complex ii protein lhcb3 0.03 Orthogroups_2024-Update
Pp1s256_10V6 No alias chlorophyll a b binding 0.04 Orthogroups_2024-Update
Pp1s27_97V6 No alias light-harvesting complex ii protein lhcb2 0.05 Orthogroups_2024-Update
Pp1s330_37V6 No alias chlorophyll a-b binding protein 0.03 Orthogroups_2024-Update
Pp1s628_7V6 No alias light-harvesting complex ii protein lhcb5 0.02 Orthogroups_2024-Update
Pp1s76_196V6 No alias chlorophyll a b binding 0.03 Orthogroups_2024-Update
Seita.2G352900.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.04 Orthogroups_2024-Update
Seita.2G366600.1 No alias component *(LHCa2) of LHC-I complex 0.03 Orthogroups_2024-Update
Seita.4G139900.1 No alias component *(LHCa1) of LHC-I complex 0.02 Orthogroups_2024-Update
Seita.6G158500.1 No alias component *(LHCa4) of LHC-I complex 0.03 Orthogroups_2024-Update
Seita.8G080900.1 No alias component *(LHCb5) of LHC-II complex 0.03 Orthogroups_2024-Update
Sobic.002G215000.2 No alias linker protein *(LHCa6) between PS-I complex and NDH complex 0.02 Orthogroups_2024-Update
Sobic.002G352100.1 No alias component *(LHCa2) of LHC-I complex 0.03 Orthogroups_2024-Update
Sobic.003G209800.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.03 Orthogroups_2024-Update
Solyc02g070940 No alias Chlorophyll a-b binding protein, chloroplastic (AHRD... 0.04 Orthogroups_2024-Update
Solyc02g070950 No alias Chlorophyll a-b binding protein, chloroplastic (AHRD... 0.04 Orthogroups_2024-Update
Solyc02g070970 No alias Chlorophyll a-b binding protein, chloroplastic (AHRD... 0.04 Orthogroups_2024-Update
Solyc02g070980 No alias Chlorophyll a-b binding protein, chloroplastic (AHRD... 0.05 Orthogroups_2024-Update
Solyc02g070990 No alias Chlorophyll a-b binding protein, chloroplastic (AHRD... 0.04 Orthogroups_2024-Update
Solyc02g071000 No alias Chlorophyll a-b binding protein, chloroplastic (AHRD... 0.04 Orthogroups_2024-Update
Solyc02g071010 No alias Chlorophyll a-b binding protein, chloroplastic (AHRD... 0.04 Orthogroups_2024-Update
Solyc02g071030 No alias Chlorophyll a-b binding protein, chloroplastic (AHRD... 0.04 Orthogroups_2024-Update
Solyc03g005770 No alias chlorophyll a/b-binding protein 0.03 Orthogroups_2024-Update
Solyc03g005780 No alias chlorophyll a/b-binding protein Cab-3C 0.04 Orthogroups_2024-Update
Solyc03g005790 No alias Chlorophyll a-b binding protein, chloroplastic (AHRD... 0.04 Orthogroups_2024-Update
Solyc03g115900 No alias chlorophyll a-b binding protein CAB11 0.05 Orthogroups_2024-Update
Solyc05g056050 No alias Chlorophyll a-b binding protein, chloroplastic (AHRD... 0.04 Orthogroups_2024-Update
Solyc06g063370 No alias Type I (26 kD) CP29 polypeptide 0.04 Orthogroups_2024-Update
Solyc06g069730 No alias chlorophyll a-b binding protein Cab12 0.03 Orthogroups_2024-Update
Solyc07g047850 No alias Chlorophyll a-b binding protein, chloroplastic (AHRD... 0.02 Orthogroups_2024-Update
Solyc07g063600 No alias Chlorophyll a-b binding protein, chloroplastic (AHRD... 0.04 Orthogroups_2024-Update
Solyc08g067320 No alias Chlorophyll a-b binding protein, chloroplastic (AHRD... 0.04 Orthogroups_2024-Update
Solyc08g067330 No alias Chlorophyll a-b binding protein, chloroplastic (AHRD... 0.04 Orthogroups_2024-Update
Solyc10g006230 No alias Chlorophyll a-b binding protein, chloroplastic (AHRD... 0.04 Orthogroups_2024-Update
Solyc12g006140 No alias Cab-5 gene encoding chlorophyll a/b-binding protein 0.03 Orthogroups_2024-Update
Solyc12g011450 No alias Chlorophyll a-b binding protein, chloroplastic (AHRD... 0.04 Orthogroups_2024-Update
Sopen02g019860 No alias Chlorophyll A-B binding protein 0.02 Orthogroups_2024-Update
Sopen02g020010 No alias Chlorophyll A-B binding protein 0.02 Orthogroups_2024-Update
Sopen02g020030 No alias Chlorophyll A-B binding protein 0.03 Orthogroups_2024-Update
Sopen02g020050 No alias Chlorophyll A-B binding protein 0.03 Orthogroups_2024-Update
Sopen02g020060 No alias Chlorophyll A-B binding protein 0.03 Orthogroups_2024-Update
Sopen02g020070 No alias Chlorophyll A-B binding protein 0.02 Orthogroups_2024-Update
Sopen02g020090 No alias Chlorophyll A-B binding protein 0.02 Orthogroups_2024-Update
Sopen03g001780 No alias Chlorophyll A-B binding protein 0.02 Orthogroups_2024-Update
Sopen05g034460 No alias Chlorophyll A-B binding protein 0.02 Orthogroups_2024-Update
Sopen06g022840 No alias Chlorophyll A-B binding protein 0.03 Orthogroups_2024-Update
Sopen06g027030 No alias Chlorophyll A-B binding protein 0.03 Orthogroups_2024-Update
Sopen07g024290 No alias Chlorophyll A-B binding protein 0.02 Orthogroups_2024-Update
Sopen07g031780 No alias Chlorophyll A-B binding protein 0.02 Orthogroups_2024-Update
Sopen08g021280 No alias Chlorophyll A-B binding protein 0.03 Orthogroups_2024-Update
Sopen10g002190 No alias Chlorophyll A-B binding protein 0.03 Orthogroups_2024-Update
Sopen12g002100 No alias Chlorophyll A-B binding protein 0.02 Orthogroups_2024-Update
Sopen12g006800 No alias Chlorophyll A-B binding protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP Predicted GO
MF GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity IEP Predicted GO
MF GO:0004650 polygalacturonase activity IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
BP GO:0006555 methionine metabolic process IEP Predicted GO
MF GO:0008047 enzyme activator activity IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0010109 regulation of photosynthesis IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
MF GO:0010242 oxygen evolving activity IEP Predicted GO
BP GO:0015936 coenzyme A metabolic process IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0042548 regulation of photosynthesis, light reaction IEP Predicted GO
BP GO:0042549 photosystem II stabilization IEP Predicted GO
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Predicted GO
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 58 212
No external refs found!