Description : GATA zinc finger
Gene families : OG_42_0000071 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000071_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Solanum release: Sopen01g026800 | |
Cluster | HCCA clusters: Cluster_48 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_09786 | No alias | gata transcription factor 2 | 0.03 | Orthogroups_2024-Update | |
Bradi1g03020 | No alias | GATA transcription factor 16 | 0.02 | Orthogroups_2024-Update | |
Brara.A00355.1 | No alias | transcription factor *(A/B-GATA) | 0.02 | Orthogroups_2024-Update | |
Glyma.02G073900 | No alias | GATA transcription factor 4 | 0.02 | Orthogroups_2024-Update | |
PSME_00050760-RA | No alias | no hits & (original description: no original description) | 0.04 | Orthogroups_2024-Update | |
Solyc09g075610 | No alias | GATA transcription factor, putative (AHRD V3.3 *** B9RNI7_RICCO) | 0.03 | Orthogroups_2024-Update | |
Solyc10g018560 | No alias | GATA transcription factor (AHRD V3.3 *** K4CYY0_SOLLC) | 0.02 | Orthogroups_2024-Update | |
Sopen05g032880 | No alias | GATA zinc finger | 0.04 | Orthogroups_2024-Update | |
Sopen08g020340 | No alias | GATA zinc finger | 0.04 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | InterProScan predictions |
MF | GO:0008270 | zinc ion binding | IEA | InterProScan predictions |
MF | GO:0043565 | sequence-specific DNA binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000679 | Znf_GATA | 94 | 128 |
No external refs found! |