Description : Pumilio-family RNA binding repeat
Gene families : OG_42_0004039 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004039_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Solanum release: Sopen01g026980 | |
Cluster | HCCA clusters: Cluster_29 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_18467 | No alias | pumilio-like 24 | 0.03 | Orthogroups_2024-Update | |
At3g16810 | No alias | Pumilio homolog 24 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRZ3] | 0.07 | Orthogroups_2024-Update | |
Bradi1g03030 | No alias | pumilio 24 | 0.14 | Orthogroups_2024-Update | |
Brara.E02483.1 | No alias | rRNA processing factor involved in ITS2 rRNA removal *(APUM24) | 0.1 | Orthogroups_2024-Update | |
Cre12.g528950 | No alias | pumilio 24 | 0.11 | Orthogroups_2024-Update | |
HORVU5Hr1G116320.2 | No alias | rRNA processing factor involved in ITS2 rRNA removal *(APUM24) | 0.07 | Orthogroups_2024-Update | |
Kfl00404_0120 | kfl00404_0120_v1.1 | (at3g16810 : 260.0) Encodes a member of the Arabidopsis... | 0.03 | Orthogroups_2024-Update | |
Mp7g01710.1 | No alias | APUM24 rRNA processing factor involved in ITS2 rRNA removal | 0.03 | Orthogroups_2024-Update | |
Potri.008G211400 | No alias | pumilio 24 | 0.07 | Orthogroups_2024-Update | |
Pp1s263_19V6 | No alias | kiaa0020 protein | 0.08 | Orthogroups_2024-Update | |
Seita.9G025100.1 | No alias | rRNA processing factor involved in ITS2 rRNA removal *(APUM24) | 0.12 | Orthogroups_2024-Update | |
Sobic.001G024000.1 | No alias | rRNA processing factor involved in ITS2 rRNA removal *(APUM24) | 0.11 | Orthogroups_2024-Update | |
Solyc01g065580 | No alias | Pumilio-like protein (AHRD V3.3 *** A0A0B0MGW0_GOSAR) | 0.18 | Orthogroups_2024-Update | |
evm.model.contig_516.2 | No alias | (gnl|cdd|68872 : 113.0) no description available &... | 0.09 | Orthogroups_2024-Update | |
evm.model.tig00000615.61 | No alias | (at3g16810 : 157.0) Encodes a member of the Arabidopsis... | 0.12 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
No external refs found! |