426328

Description : pleiotropic drug resistance 6

Gene families : OG_42_0000055 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000055_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Selaginella: 426328
Cluster	HCCA clusters: Cluster_52

Target	Alias	Description	ECC score	Gene Family Method
101338	No alias	pleiotropic drug resistance 11	0.04	Orthogroups_2024-Update
96729	No alias	pleiotropic drug resistance 1	0.03	Orthogroups_2024-Update
99541	No alias	pleiotropic drug resistance 12	0.05	Orthogroups_2024-Update
A4A49_09052	No alias	pleiotropic drug resistance protein 1	0.03	Orthogroups_2024-Update
A4A49_23886	No alias	pleiotropic drug resistance protein 1	0.02	Orthogroups_2024-Update
A4A49_31699	No alias	pleiotropic drug resistance protein 2	0.02	Orthogroups_2024-Update
At1g15520	No alias	ABC transporter G family member 40...	0.02	Orthogroups_2024-Update
Bradi3g34890	No alias	pleiotropic drug resistance 12	0.03	Orthogroups_2024-Update
GRMZM5G892675	No alias	pleiotropic drug resistance 12	0.02	Orthogroups_2024-Update
Glyma.03G168000	No alias	pleiotropic drug resistance 12	0.03	Orthogroups_2024-Update
Glyma.03G168101	No alias	pleiotropic drug resistance 12	0.04	Orthogroups_2024-Update
Glyma.03G192700	No alias	pleiotropic drug resistance 11	0.02	Orthogroups_2024-Update
Glyma.13G361900	No alias	pleiotropic drug resistance 12	0.02	Orthogroups_2024-Update
Glyma.15G019200	No alias	ABC-2 and Plant PDR ABC-type transporter family protein	0.02	Orthogroups_2024-Update
HORVU3Hr1G053380.1	No alias	subfamily ABCG transporter	0.04	Orthogroups_2024-Update
HORVU3Hr1G071470.1	No alias	subfamily ABCG transporter	0.03	Orthogroups_2024-Update
HORVU4Hr1G081040.4	No alias	subfamily ABCG transporter	0.03	Orthogroups_2024-Update
LOC_Os09g16458	No alias	pleiotropic drug resistance protein 4, putative, expressed	0.02	Orthogroups_2024-Update
MA_10425791g0020	No alias	(q8gu88\|pdr7_orysa : 1086.0) Putative pleiotropic drug...	0.02	Orthogroups_2024-Update
MA_10426978g0010	No alias	(at3g16340 : 369.0) pleiotropic drug resistance 1...	0.02	Orthogroups_2024-Update
MA_10427561g0010	No alias	(q8gu88\|pdr7_orysa : 1276.0) Putative pleiotropic drug...	0.03	Orthogroups_2024-Update
MA_10430834g0020	No alias	(q7fmw4\|pdr15_orysa : 384.0) Pleiotropic drug resistance...	0.02	Orthogroups_2024-Update
MA_135152g0010	No alias	(q5z9s8\|pdr12_orysa : 1938.0) Pleiotropic drug...	0.03	Orthogroups_2024-Update
MA_3894g0010	No alias	(q76cu2\|pdr1_tobac : 501.0) Pleiotropic drug resistance...	0.02	Orthogroups_2024-Update
PSME_00000867-RA	No alias	(q8gu92\|pdr2_orysa : 1758.0) Probable pleiotropic drug...	0.03	Orthogroups_2024-Update
PSME_00000869-RA	No alias	(q5z9s8\|pdr12_orysa : 1879.0) Pleiotropic drug...	0.04	Orthogroups_2024-Update
PSME_00001268-RA	No alias	(at1g59870 : 1834.0) ATP binding cassette transporter....	0.02	Orthogroups_2024-Update
PSME_00001761-RA	No alias	(q5z9s8\|pdr12_orysa : 1822.0) Pleiotropic drug...	0.04	Orthogroups_2024-Update
PSME_00005403-RA	No alias	(q8gu88\|pdr7_orysa : 1833.0) Putative pleiotropic drug...	0.02	Orthogroups_2024-Update
PSME_00008988-RA	No alias	(q5z9s8\|pdr12_orysa : 1221.0) Pleiotropic drug...	0.03	Orthogroups_2024-Update
PSME_00009192-RA	No alias	(q8gu88\|pdr7_orysa : 1875.0) Putative pleiotropic drug...	0.02	Orthogroups_2024-Update
PSME_00009473-RA	No alias	(at2g26910 : 1773.0) pleiotropic drug resistance 4...	0.04	Orthogroups_2024-Update
PSME_00010410-RA	No alias	(q8gu88\|pdr7_orysa : 1693.0) Putative pleiotropic drug...	0.02	Orthogroups_2024-Update
PSME_00013320-RA	No alias	(q8gu88\|pdr7_orysa : 1886.0) Putative pleiotropic drug...	0.05	Orthogroups_2024-Update
PSME_00013643-RA	No alias	(q76cu2\|pdr1_tobac : 1408.0) Pleiotropic drug resistance...	0.04	Orthogroups_2024-Update
PSME_00014724-RA	No alias	(q76cu2\|pdr1_tobac : 1860.0) Pleiotropic drug resistance...	0.04	Orthogroups_2024-Update
PSME_00015395-RA	No alias	(q76cu2\|pdr1_tobac : 1904.0) Pleiotropic drug resistance...	0.03	Orthogroups_2024-Update
Potri.001G048700	No alias	pleiotropic drug resistance 12	0.02	Orthogroups_2024-Update
Potri.001G048900	No alias	pleiotropic drug resistance 12	0.03	Orthogroups_2024-Update
Potri.001G175700	No alias	pleiotropic drug resistance 12	0.02	Orthogroups_2024-Update
Potri.006G248500	No alias	pleiotropic drug resistance 12	0.03	Orthogroups_2024-Update
Pp1s12_29V6	No alias	atp-binding cassette	0.03	Orthogroups_2024-Update
Pp1s15_137V6	No alias	atp-binding cassette	0.03	Orthogroups_2024-Update
Pp1s170_10V6	No alias	atp-binding cassette	0.02	Orthogroups_2024-Update
Pp1s72_306V6	No alias	atp-binding cassette	0.01	Orthogroups_2024-Update
Seita.2G179600.1	No alias	subfamily ABCG transporter	0.04	Orthogroups_2024-Update
Seita.4G181500.1	No alias	subfamily ABCG transporter	0.03	Orthogroups_2024-Update
Seita.5G115400.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Seita.5G221500.1	No alias	subfamily ABCG transporter	0.03	Orthogroups_2024-Update
Seita.5G221700.1	No alias	subfamily ABCG transporter	0.02	Orthogroups_2024-Update
Seita.9G304200.1	No alias	subfamily ABCG transporter	0.01	Orthogroups_2024-Update
Sobic.003G215600.1	No alias	subfamily ABCG transporter	0.02	Orthogroups_2024-Update
Sobic.003G215800.1	No alias	subfamily ABCG transporter	0.02	Orthogroups_2024-Update
Sobic.003G216000.1	No alias	subfamily ABCG transporter	0.03	Orthogroups_2024-Update
Sobic.003G216166.1	No alias	subfamily ABCG transporter	0.05	Orthogroups_2024-Update
Sobic.003G216232.1	No alias	subfamily ABCG transporter	0.03	Orthogroups_2024-Update
Solyc09g091670	No alias	Pleiotropic drug resistance ABC transporter (AHRD V3.3...	0.03	Orthogroups_2024-Update
Solyc11g007280	No alias	Pleiotropic drug resistance ABC transporter (AHRD V3.3...	0.03	Orthogroups_2024-Update
Solyc12g100180	No alias	Pleiotropic drug resistance ABC transporter (AHRD V3.3...	0.03	Orthogroups_2024-Update
Sopen05g032100	No alias	ABC-2 type transporter	0.02	Orthogroups_2024-Update
Sopen09g034570	No alias	ABC-2 type transporter	0.02	Orthogroups_2024-Update
Sopen11g003180	No alias	ABC-2 type transporter	0.02	Orthogroups_2024-Update
evm.model.contig_440.1	No alias	(at2g29940 : 522.0) pleiotropic drug resistance 3...	0.01	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	InterProScan predictions
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0008144	drug binding	None	Extended
CC	GO:0016020	membrane	IEA	InterProScan predictions
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	InterProScan predictions
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000287	magnesium ion binding	IEP	Predicted GO
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Predicted GO
MF	GO:0004568	chitinase activity	IEP	Predicted GO
MF	GO:0004814	arginine-tRNA ligase activity	IEP	Predicted GO
MF	GO:0005506	iron ion binding	IEP	Predicted GO
BP	GO:0006022	aminoglycan metabolic process	IEP	Predicted GO
BP	GO:0006026	aminoglycan catabolic process	IEP	Predicted GO
BP	GO:0006030	chitin metabolic process	IEP	Predicted GO
BP	GO:0006032	chitin catabolic process	IEP	Predicted GO
BP	GO:0006040	amino sugar metabolic process	IEP	Predicted GO
BP	GO:0006420	arginyl-tRNA aminoacylation	IEP	Predicted GO
BP	GO:0006721	terpenoid metabolic process	IEP	Predicted GO
MF	GO:0008061	chitin binding	IEP	Predicted GO
BP	GO:0008150	biological_process	IEP	Predicted GO
BP	GO:0008152	metabolic process	IEP	Predicted GO
MF	GO:0008661	1-deoxy-D-xylulose-5-phosphate synthase activity	IEP	Predicted GO
BP	GO:0009057	macromolecule catabolic process	IEP	Predicted GO
CC	GO:0009507	chloroplast	IEP	Predicted GO
CC	GO:0009536	plastid	IEP	Predicted GO
MF	GO:0010333	terpene synthase activity	IEP	Predicted GO
MF	GO:0015079	potassium ion transmembrane transporter activity	IEP	Predicted GO
BP	GO:0016114	terpenoid biosynthetic process	IEP	Predicted GO
MF	GO:0016491	oxidoreductase activity	IEP	Predicted GO
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Predicted GO
MF	GO:0016744	transferase activity, transferring aldehyde or ketonic groups	IEP	Predicted GO
MF	GO:0016829	lyase activity	IEP	Predicted GO
MF	GO:0016835	carbon-oxygen lyase activity	IEP	Predicted GO
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	IEP	Predicted GO
BP	GO:0016998	cell wall macromolecule catabolic process	IEP	Predicted GO
MF	GO:0020037	heme binding	IEP	Predicted GO
BP	GO:0042737	drug catabolic process	IEP	Predicted GO
MF	GO:0043169	cation binding	IEP	Predicted GO
BP	GO:0044036	cell wall macromolecule metabolic process	IEP	Predicted GO
BP	GO:0046348	amino sugar catabolic process	IEP	Predicted GO
MF	GO:0046422	violaxanthin de-epoxidase activity	IEP	Predicted GO
MF	GO:0046872	metal ion binding	IEP	Predicted GO
MF	GO:0046906	tetrapyrrole binding	IEP	Predicted GO
MF	GO:0046914	transition metal ion binding	IEP	Predicted GO
MF	GO:0048037	cofactor binding	IEP	Predicted GO
BP	GO:0055114	oxidation-reduction process	IEP	Predicted GO
BP	GO:0071805	potassium ion transmembrane transport	IEP	Predicted GO
BP	GO:1901071	glucosamine-containing compound metabolic process	IEP	Predicted GO
BP	GO:1901072	glucosamine-containing compound catabolic process	IEP	Predicted GO
BP	GO:1901136	carbohydrate derivative catabolic process	IEP	Predicted GO
BP	GO:1901565	organonitrogen compound catabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR013525	ABC_2_trans	1166	1379
IPR013525	ABC_2_trans	518	730
IPR029481	ABC_trans_N	81	140
IPR003439	ABC_transporter-like	869	1021
IPR013581	PDR_assoc	735	796
IPR003439	ABC_transporter-like	183	364

External Links

No external refs found!

426328

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation