426328


Description : pleiotropic drug resistance 6


Gene families : OG_42_0000055 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000055_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 426328
Cluster HCCA clusters: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
101338 No alias pleiotropic drug resistance 11 0.04 Orthogroups_2024-Update
96729 No alias pleiotropic drug resistance 1 0.03 Orthogroups_2024-Update
99541 No alias pleiotropic drug resistance 12 0.05 Orthogroups_2024-Update
A4A49_09052 No alias pleiotropic drug resistance protein 1 0.03 Orthogroups_2024-Update
A4A49_23886 No alias pleiotropic drug resistance protein 1 0.02 Orthogroups_2024-Update
A4A49_31699 No alias pleiotropic drug resistance protein 2 0.02 Orthogroups_2024-Update
At1g15520 No alias ABC transporter G family member 40... 0.02 Orthogroups_2024-Update
Bradi3g34890 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
GRMZM5G892675 No alias pleiotropic drug resistance 12 0.02 Orthogroups_2024-Update
Glyma.03G168000 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
Glyma.03G168101 No alias pleiotropic drug resistance 12 0.04 Orthogroups_2024-Update
Glyma.03G192700 No alias pleiotropic drug resistance 11 0.02 Orthogroups_2024-Update
Glyma.13G361900 No alias pleiotropic drug resistance 12 0.02 Orthogroups_2024-Update
Glyma.15G019200 No alias ABC-2 and Plant PDR ABC-type transporter family protein 0.02 Orthogroups_2024-Update
HORVU3Hr1G053380.1 No alias subfamily ABCG transporter 0.04 Orthogroups_2024-Update
HORVU3Hr1G071470.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
HORVU4Hr1G081040.4 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
LOC_Os09g16458 No alias pleiotropic drug resistance protein 4, putative, expressed 0.02 Orthogroups_2024-Update
MA_10425791g0020 No alias (q8gu88|pdr7_orysa : 1086.0) Putative pleiotropic drug... 0.02 Orthogroups_2024-Update
MA_10426978g0010 No alias (at3g16340 : 369.0) pleiotropic drug resistance 1... 0.02 Orthogroups_2024-Update
MA_10427561g0010 No alias (q8gu88|pdr7_orysa : 1276.0) Putative pleiotropic drug... 0.03 Orthogroups_2024-Update
MA_10430834g0020 No alias (q7fmw4|pdr15_orysa : 384.0) Pleiotropic drug resistance... 0.02 Orthogroups_2024-Update
MA_135152g0010 No alias (q5z9s8|pdr12_orysa : 1938.0) Pleiotropic drug... 0.03 Orthogroups_2024-Update
MA_3894g0010 No alias (q76cu2|pdr1_tobac : 501.0) Pleiotropic drug resistance... 0.02 Orthogroups_2024-Update
PSME_00000867-RA No alias (q8gu92|pdr2_orysa : 1758.0) Probable pleiotropic drug... 0.03 Orthogroups_2024-Update
PSME_00000869-RA No alias (q5z9s8|pdr12_orysa : 1879.0) Pleiotropic drug... 0.04 Orthogroups_2024-Update
PSME_00001268-RA No alias (at1g59870 : 1834.0) ATP binding cassette transporter.... 0.02 Orthogroups_2024-Update
PSME_00001761-RA No alias (q5z9s8|pdr12_orysa : 1822.0) Pleiotropic drug... 0.04 Orthogroups_2024-Update
PSME_00005403-RA No alias (q8gu88|pdr7_orysa : 1833.0) Putative pleiotropic drug... 0.02 Orthogroups_2024-Update
PSME_00008988-RA No alias (q5z9s8|pdr12_orysa : 1221.0) Pleiotropic drug... 0.03 Orthogroups_2024-Update
PSME_00009192-RA No alias (q8gu88|pdr7_orysa : 1875.0) Putative pleiotropic drug... 0.02 Orthogroups_2024-Update
PSME_00009473-RA No alias (at2g26910 : 1773.0) pleiotropic drug resistance 4... 0.04 Orthogroups_2024-Update
PSME_00010410-RA No alias (q8gu88|pdr7_orysa : 1693.0) Putative pleiotropic drug... 0.02 Orthogroups_2024-Update
PSME_00013320-RA No alias (q8gu88|pdr7_orysa : 1886.0) Putative pleiotropic drug... 0.05 Orthogroups_2024-Update
PSME_00013643-RA No alias (q76cu2|pdr1_tobac : 1408.0) Pleiotropic drug resistance... 0.04 Orthogroups_2024-Update
PSME_00014724-RA No alias (q76cu2|pdr1_tobac : 1860.0) Pleiotropic drug resistance... 0.04 Orthogroups_2024-Update
PSME_00015395-RA No alias (q76cu2|pdr1_tobac : 1904.0) Pleiotropic drug resistance... 0.03 Orthogroups_2024-Update
Potri.001G048700 No alias pleiotropic drug resistance 12 0.02 Orthogroups_2024-Update
Potri.001G048900 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
Potri.001G175700 No alias pleiotropic drug resistance 12 0.02 Orthogroups_2024-Update
Potri.006G248500 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
Pp1s12_29V6 No alias atp-binding cassette 0.03 Orthogroups_2024-Update
Pp1s15_137V6 No alias atp-binding cassette 0.03 Orthogroups_2024-Update
Pp1s170_10V6 No alias atp-binding cassette 0.02 Orthogroups_2024-Update
Pp1s72_306V6 No alias atp-binding cassette 0.01 Orthogroups_2024-Update
Seita.2G179600.1 No alias subfamily ABCG transporter 0.04 Orthogroups_2024-Update
Seita.4G181500.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Seita.5G115400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.5G221500.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Seita.5G221700.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Seita.9G304200.1 No alias subfamily ABCG transporter 0.01 Orthogroups_2024-Update
Sobic.003G215600.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Sobic.003G215800.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Sobic.003G216000.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Sobic.003G216166.1 No alias subfamily ABCG transporter 0.05 Orthogroups_2024-Update
Sobic.003G216232.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Solyc09g091670 No alias Pleiotropic drug resistance ABC transporter (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc11g007280 No alias Pleiotropic drug resistance ABC transporter (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc12g100180 No alias Pleiotropic drug resistance ABC transporter (AHRD V3.3... 0.03 Orthogroups_2024-Update
Sopen05g032100 No alias ABC-2 type transporter 0.02 Orthogroups_2024-Update
Sopen09g034570 No alias ABC-2 type transporter 0.02 Orthogroups_2024-Update
Sopen11g003180 No alias ABC-2 type transporter 0.02 Orthogroups_2024-Update
evm.model.contig_440.1 No alias (at2g29940 : 522.0) pleiotropic drug resistance 3... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0016887 ATPase activity IEA InterProScan predictions
Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0004814 arginine-tRNA ligase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0006420 arginyl-tRNA aminoacylation IEP Predicted GO
BP GO:0006721 terpenoid metabolic process IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
BP GO:0016114 terpenoid biosynthetic process IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016744 transferase activity, transferring aldehyde or ketonic groups IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
MF GO:0046422 violaxanthin de-epoxidase activity IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 1166 1379
IPR013525 ABC_2_trans 518 730
IPR029481 ABC_trans_N 81 140
IPR003439 ABC_transporter-like 869 1021
IPR013581 PDR_assoc 735 796
IPR003439 ABC_transporter-like 183 364
No external refs found!