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  5. Sopen01g027550

Sopen01g027550


Description : TIR domain


Gene families : OG_42_0000010 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen01g027550
Cluster HCCA clusters: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
A4A49_18482 No alias tmv resistance protein n 0.02 Orthogroups_2024-Update
At1g31540 No alias Disease resistance protein (TIR-NBS-LRR class) family... 0.02 Orthogroups_2024-Update
At5g38340 No alias Disease resistance protein (TIR-NBS-LRR class) family... 0.03 Orthogroups_2024-Update
Glyma.03G048500 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.02 Orthogroups_2024-Update
Glyma.03G075300 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Orthogroups_2024-Update
MA_407343g0010 No alias (at1g27170 : 143.0) transmembrane receptors;ATP binding;... 0.02 Orthogroups_2024-Update
Potri.005G003900 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Potri.011G015400 No alias transmembrane receptors;ATP binding 0.03 Orthogroups_2024-Update
Potri.013G097200 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
BP GO:0007165 signal transduction IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000157 TIR_dom 18 154
No external refs found!